update plot target and load beast dir

ktmeaton · May 21, 2021 · 87c715f · 87c715f
1 parent 6e469bc
commit 87c715f
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/workflow/rules/targets.smk b/workflow/rules/targets.smk
@@ -383,7 +383,7 @@ rule auspice_prune_all:
 # Plot
 #------------------------------------------------------------------------------#
 
-plot_missing_data_all_input = expand(results_dir + "/snippy_multi/all/{locus_name}/prune/snippy-multi.snps.missing-data.html",
+plot_missing_data_all_input = expand(results_dir + "/snippy_multi/all/{locus_name}/full/snippy-multi.snps.missing-data.html",
 				                          locus_name = config["reference_locus_name"],
 					                     )
 plot_missing_data_sra_input = [ x.replace("all", "sra") for x in plot_missing_data_all_input ]

diff --git a/workflow/scripts/project_load.sh b/workflow/scripts/project_load.sh
@@ -10,7 +10,7 @@ SCRIPT_DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" &> /dev/null && pwd )"
 
 # All directories
 EXCLUDE_DIR=(
-  beast
+  # beast
 	);
 
 if [[ ! $RESULTS_DIR || ! $BACKUP_DIR ]];
-Original file line number
+Diff line change
@@ Expand Up @@
     # All directories
     EXCLUDE_DIR=(
-      beast
+      # beast
     	);
     if [[ ! $RESULTS_DIR || ! $BACKUP_DIR ]];
@@ Expand Down @@