From 8ded9416654a3e4a501a379048372f15e8137b2e Mon Sep 17 00:00:00 2001 From: Katherine Eaton Date: Fri, 30 Apr 2021 16:31:58 -0400 Subject: [PATCH] remove mugration from all targets --- workflow/Snakefile | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/workflow/Snakefile b/workflow/Snakefile index 0a844712..565691b7 100644 --- a/workflow/Snakefile +++ b/workflow/Snakefile @@ -116,12 +116,12 @@ rule all: # Alignment snippy_multi_filter_prune_all_input, # Phylo - #iqtree_all_input, - #iqtree_filter_all_input, + iqtree_all_input, + iqtree_filter_all_input, # Post-Phylo (no lsd2 for gh actions) #lsd_all_input, - mugration_all_input, - mugration_prune_all_input, + #mugration_all_input, + #mugration_prune_all_input, # Plot plot_missing_data_all_input, plot_snp_matrix_all_input,