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Convert various single-cell formats to zarr #11

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ryan-williams opened this issue Jul 3, 2018 · 0 comments
Open

Convert various single-cell formats to zarr #11

ryan-williams opened this issue Jul 3, 2018 · 0 comments

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@ryan-williams
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Tracking some data-format-conversion needs/functionality here.

WIP script for some conversions is at cli.py

Format Read Write to Zarr
Locally From cloud storage In parallel w/ Spark Locally To cloud storage In parallel w/ Spark
10x (.h5)
AnnData (.h5ad)
Loom (.loom)

Notes:

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