Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

FMF query #15

Open
zmaroti opened this issue Sep 16, 2021 · 0 comments
Open

FMF query #15

zmaroti opened this issue Sep 16, 2021 · 0 comments

Comments

@zmaroti
Copy link

zmaroti commented Sep 16, 2021

Just opening the bgt-server without queries we get INFO on config parameters and the queryable sample/variant annotations from the FMF files: XXX.bgt.spl for samples, and from the annot.XXX.fmf.gz that was provided by the -d option).

However there is no function to see what are the range in INT, or FLOAT fields or what are the queryable values in case of STRING fields.

Technically we usually know it or could document it based on our databses, however It would be nice to have some function to query these on the fly using the bgt fmf command (and/or with some new flags in the bgt-server). This would allow that users who have no access to the server could explore their options.

Regards,
Zoltan

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant