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112 Open 180 Closed
112 Open 180 Closed
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Issues list

The identifier following the barcode
#330 opened Nov 16, 2024 by origami974
1
run-trust4 is very slow, what should I do to speed, my data is bulk BCR-seq
#328 opened Nov 12, 2024 by 2024-lucky
19
Clonotype counting with lower cell cell count
#321 opened Oct 23, 2024 by marcoco90
3
fastq-extractor": No such file or directory
#317 opened Oct 11, 2024 by origami974
2
Error when running trust4-stats.py
#314 opened Sep 28, 2024 by oO828
1
Size of the *_report.tsv files vary a lot across different samples
#312 opened Sep 26, 2024 by binbinZhao2017
1
GNU C++ compilation issue
#308 opened Sep 6, 2024 by asahama-takara
5
Question about consensus_count
#306 opened Sep 4, 2024 by Henrik-huang
3
10X fastq barcode+index and bam for Trust4
#305 opened Sep 2, 2024 by olu2016
4
Possibility of extracting subset of fq according to barcodeTranslate?
#301 opened Aug 7, 2024 by yuyuleung
11
Help to highlight potential differences in BCR maturation between mice of different genotypes
#298 opened Aug 1, 2024 by aeeckhou
5
How to get indicators similar to 10X reports？
#296 opened Jul 30, 2024 by Liripo
5
IndexError: list index out of range
#293 opened Jul 17, 2024 by origami974
5
How does the trimming work
#292 opened Jul 16, 2024 by ulyssebaruchel
1
run of Fastq file error
#287 opened Jul 12, 2024 by SimonDemontardy
2
failed: 256 at ./run-trust4 line 57.
#286 opened Jul 11, 2024 by origami974
5
Best way to run TRUST4 on TCR-sequencing data obtained from the Illumina MiSeq platform
#285 opened Jul 8, 2024 by dcarbajo
1
possible pseudogene alignment
#284 opened Jul 2, 2024 by marleysizzy
1
umis and clonotype of trust-barcoderep-to-10X.pl results
#282 opened Jun 24, 2024 by xingyongma
4
Should I use the airr or the barcode_airr tsv file?
#280 opened Jun 19, 2024 by xingyongma
5
Running TRUST4 with non-10X single-cell data, barcodes are in the RG:Z headers of fastq
#277 opened May 31, 2024 by LukaP-BB
6
How trust4 filters barcodes from cdr3.out and anna.fa to barcode_report?
#275 opened May 31, 2024 by yuyuleung
4
TRUST4 config for 10X Genomics
#272 opened May 20, 2024 by khoidnyds
6
I would like to know how Trust4 can directly analyze paired-end .fastq format data from the 10X Genomics platform for single-cell analysis.？
#271 opened May 17, 2024 by fight2021
21
How to run TRUST4 with multiple paired-end read files
#269 opened May 10, 2024 by dcarbajo
5
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