setup.py

""" :noindex:
Setup.py file with generic info
"""
import os
from setuptools import setup
from setuptools import find_packages
from setuptools.command.test import test as testcommand

""" :noindex:
Setup.py file that governs the installatino process of
`how_to_make_a_python_package` it is used by
`conda install -f environment.yml` which will install the package in an
environment specified in that file.

"""

# This installs the pytest command. Meaning that you can simply type pytest
# anywhere and "pytest" will look for all available tests in the current
# directory and subdirectories recursively (not yet supported in the setup.cfg)


class PyTest(testcommand):
    user_options = [('pytest-args=', 'a', "Arguments to pass to py.tests")]

    def initialize_options(self):
        testcommand.initialize_options(self)
        self.pytest_args = []

    def run_tests(self):
        import pytest
        import sys
        errno = pytest.main(self.pytest_args)
        sys.exit(errno)


setup(cmdclass={'tests': PyTest})


# def read(fname) -> str:
#     """From Wenjie Lei 2019:
#     Utility function to read the README.md file.
#     Used for the long_description.  It's nice, because now 1) we have a top level
#     README.md file and 2) it's easier to type in the README.md file than to put a raw
#     string in below ...
#     """

#     try:
#         return open(os.path.join(os.path.dirname(__file__), fname)).read()
#     except Exception as e:
#         return "Can't open %s" % fname


# class PyTest(testcommand):
#     user_options = [('pytest-args=', 'a', "Arguments to pass to py.tests")]

#     def initialize_options(self):
#         testcommand.initialize_options(self)
#         self.pytest_args = []

#     def run_tests(self):
#         import pytest
#         import sys
#         errno = pytest.main(self.pytest_args)
#         sys.exit(errno)


# setup(
#     name="lwsspy",
#     description="LWSS Collection of Python Function",
#     long_description="%s" % read("README.md"),
#     version="0.0.1",
#     author="Lucas Sawade",
#     author_email="lsawade@princeton.edu",
#     license='GNU Lesser General Public License, Version 3',
#     keywords="collection, functions",
#     url='https://github.com/lsawade/GCMT3D',
#     packages=find_packages(exclude=['*.Notebooks', '*.notebooks.*',
#                                     'notebooks.*', 'notebooks',
#                                     'paraview_tools']),
#     package_dir={"": "."},
#     include_package_data=True,
#     # exclude_package_data={'lwsspy': ['download_cache']},
#     package_data={'lwsspy': [
#         'download_cache/*',
#         'plot_util/fonts/*.ttc',
#         'plot_util/fonts/*.ttf',
#         'constant_data/gcmt/*.csv',
#         'constant_data/ttc.mat',
#         'seismo/invertcmt/*.yml'
#     ]},
#     install_requires=['numpy', 'matplotlib',  'obspy',
#                       'PyYAML', 'h5py', 'mpi4py', 'matplotlib',
#                       'pyasdf', 'autopep8', 'xarray', 'beautifulsoup4',
#                       'netcdf4', 'cartopy'
#                       #   'pyvista'
#                       ],
#     tests_require=['pytest'],
#     cmdclass={'tests': PyTest},
#     zip_safe=False,
#     classifiers=[
#         "Development Status :: 4 - Beta",
#         "Topic :: Utilities",
#         ("License :: OSI Approved "
#          ":: GNU General Public License v3 or later (GPLv3+)"),
#     ],
#     # install_requires=parse_requirements("requirements.txt"),
#     extras_require={
#         "docs": ["sphinx", "sphinx_rtd_theme", "numpydoc"],
#         "tests": ["pytest", "py"]
#     },
#     entry_points={
#         'console_scripts': [
#             'compare-catalogs = lwsspy.seismo.compare_catalogs:bin',
#             'gcmt3d-plot-measurement-histograms = lwsspy.seismo.invertcmt.plot_measurements:bin',
#             'gcmt3d-plot-measurement-histograms-pkl = lwsspy.seismo.invertcmt.plot_measurements:bin_plot_pickles',
#             'gcmt3d-fix-dlna-database = lwsspy.seismo.invertcmt.M0:bin_fix_dlna_database',
#             'gcmt3d-fix-dlna-event = lwsspy.seismo.invertcmt.M0:bin_fix_event',
#             'gcmt3d-process-final = lwsspy.seismo.invertcmt.GCMT3DInversion:bin_process_final',
#             'invert-cmt = lwsspy.seismo.invertcmt.GCMT3DInversion:bin',
#             'gcmt3d-syncdata = lwsspy.seismo.invertcmt.sync_data:bin',
#             'gcmt3d-optimstats = lwsspy.seismo.invertcmt.get_optimization_stats:bin',
#             'download-data = lwsspy.seismo.download_waveforms_to_storage:bin',
#             'plot_csv_depth_slice = lwsspy.seismo.specfem.plot_csv_depth_slice:bin',
#             'plot_specfem_xsec_depth = lwsspy.seismo.specfem.plot_specfem_xsec_depth:bin',
#             'plot-font = lwsspy.plot_util.plot_font:bin',
#             'pick_data_from_image = lwsspy.plot_util.pick_data_from_image:bin'
#         ]
#     }
# )