Quick checks

[m-clark]

From our discussion:

Code:

• Change data imports to use the web url rather than data/data.csv (e.g. https://raw.githubusercontent.com/m-clark/book-of-models/main/data/heart_disease_processed.csv)
• Make sure it runs as presented
• Make sure that even though we might present the result as a pretty table, that the code would produce that result (even though we actually hide it)
• Check for consistency of presentation (R vs. Python, model vs. model)

GLM

• Review GLM chap suggestions #59 as well as the changes that have been made to see if up to snuff
• Let's move any 'by-hand' models that were in GLM and extensions to a new appendix doc that will be available in the web version only.

Other

• Update any figs you come across to save the figure and use so it will work for pdf. Maybe we should just do that as default instead of conditional, but doing it that way would allow us to do grayscale for pdf specifically.
• Also, I figured out how to do that annotated equation stuff. It requires that package, and does not appear to work for html. But I tried it in the current conclusion chapter with success, and just took a screenshot for html. I think the colors/text should print fine if the text is as at least dark enough. I would like to update the linear model chapter with this stuff at some point. Feel free to take a shot. Might be useful for class stuff too.

[saberry]

I've started throwing the full links into the code, @m-clark, but they are very likely going to run into the margins (in addition to not being too friendly to type). Is changing them over to a tiny url okay?

[m-clark]

Yeah, definitely have to watch out for that, we have several pain points on code getting into the margins remaining even after I've tried to catch most, so best not to add to it. I'll add the raw url to the dataset descriptions in the appendix (which is up to date but not pushed yet)

[m-clark]

Side note: the problem with title spacing on tbl/fig captions was due to a single table (in glm chapter) that had a label but no caption. Every thing was fine before that and incorrectly spaced after. Giving it a title fixes the problem.

[m-clark]

Let's move any 'by-hand' models that were in GLM and extensions to a new appendix doc that will be available in the web version only.

I'd forgotten about this but on revisiting think it may still be a good idea. Initially the 'by-hand' was going to be the focus, but I'm not as convinced it's as useful in the current. However, we condensed the GLM stuff to one demo. We also dropped the additive (which is available in my other doc) and mixed (which I've never felt has an intuitive/simple approach), leaving only the quantile, which is an easy demo similar to GLM.