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eLabFTW integration #33

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manulera opened this issue Feb 6, 2025 · 2 comments
Open

eLabFTW integration #33

manulera opened this issue Feb 6, 2025 · 2 comments

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@manulera
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manulera commented Feb 6, 2025

  • Where to set the backend url
  • Handling API keys (for development)
  • Primers and constrained fields? regex?
  • Restriction fragments. Gb file is not sufficient to store this information.
  • Loading files that have been saved by OC, could we set some metadata pointing to the files so that the right thing is loaded straight away?
    • Loading inner history?
  • Saving intermediates
  • Point only to immediate parents?
  • Same name warnings
  • Sequencing files
  • Downloading json files and references in them
  • See primer list with their sequences
  • Embedding the frame makes it a bit hard, would it be possible to take up all the space below the bar?
  • Possible inconsistencies between names in the app and names in the database, even when saving (choose title)
  • plannotate
@manulera
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manulera commented Feb 7, 2025

Hi @NicolasCARPi I have some preliminary stuff on top of what I did for the initial demo. I have a few questions so maybe it would be good to schedule a call but it's looking good! See the video below for some preview of the features.

Some of the naming of things should be improved (e.g. importing buttons should be better named)

output.mp4

You can try it with this docker-compose file https://github.com/manulera/OpenCloning/blob/elabFTW-integration/integrations/elabFTW/docker-compose.yml

Error handling is not really great right now, but you can reproduce what I did I think

@NicolasCARPi
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Hello Manu,

This looks amazing, great job! 🚀 🧬

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