Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[Bundles] Additional logs for client errors #4651

Merged
merged 6 commits into from
Oct 15, 2024
Merged
Show file tree
Hide file tree
Changes from 5 commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
Original file line number Diff line number Diff line change
Expand Up @@ -7,6 +7,7 @@
using System.Collections.Generic;
using System.Threading;
using System.Threading.Tasks;
using Microsoft.Extensions.Logging;
using Microsoft.Extensions.Primitives;
using Microsoft.Health.Core.Features.Context;
using Microsoft.Health.Core.Features.Security.Authorization;
Expand Down Expand Up @@ -56,7 +57,12 @@ public CreateBulkDeleteHandlerTests()
requestHeaders: new Dictionary<string, StringValues>(),
responseHeaders: new Dictionary<string, StringValues>());

_handler = new CreateBulkDeleteHandler(_authorizationService, _queueClient, _contextAccessor, _searchService);
_handler = new CreateBulkDeleteHandler(
_authorizationService,
_queueClient,
_contextAccessor,
_searchService,
Substitute.For<ILogger<CreateBulkDeleteHandler>>());
}

[Fact]
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -10,6 +10,7 @@
using System.Threading.Tasks;
using EnsureThat;
using MediatR;
using Microsoft.Extensions.Logging;
using Microsoft.Health.Core;
using Microsoft.Health.Core.Features.Context;
using Microsoft.Health.Core.Features.Security.Authorization;
Expand All @@ -32,17 +33,20 @@ public class CreateBulkDeleteHandler : IRequestHandler<CreateBulkDeleteRequest,
private readonly IQueueClient _queueClient;
private readonly RequestContextAccessor<IFhirRequestContext> _contextAccessor;
private readonly ISearchService _searchService;
private readonly ILogger<CreateBulkDeleteHandler> _logger;

public CreateBulkDeleteHandler(
IAuthorizationService<DataActions> authorizationService,
IQueueClient queueClient,
RequestContextAccessor<IFhirRequestContext> contextAccessor,
ISearchService searchService)
ISearchService searchService,
ILogger<CreateBulkDeleteHandler> logger)
{
_authorizationService = EnsureArg.IsNotNull(authorizationService, nameof(authorizationService));
_queueClient = EnsureArg.IsNotNull(queueClient, nameof(queueClient));
_contextAccessor = EnsureArg.IsNotNull(contextAccessor, nameof(contextAccessor));
_searchService = EnsureArg.IsNotNull(searchService, nameof(searchService));
_logger = EnsureArg.IsNotNull(logger, nameof(logger));
}

public async Task<CreateBulkDeleteResponse> Handle(CreateBulkDeleteRequest request, CancellationToken cancellationToken)
Expand All @@ -65,7 +69,7 @@ public async Task<CreateBulkDeleteResponse> Handle(CreateBulkDeleteRequest reque
searchParameters.Add(Tuple.Create("_lastUpdated", $"lt{dateCurrent}"));

// Should not run bulk delete if any of the search parameters are invalid as it can lead to unpredicatable results
await _searchService.ConditionalSearchAsync(request.ResourceType, searchParameters, cancellationToken, count: 1);
await _searchService.ConditionalSearchAsync(request.ResourceType, searchParameters, cancellationToken, count: 1, logger: _logger);
if (_contextAccessor.RequestContext?.BundleIssues?.Count > 0)
{
throw new BadRequestException(_contextAccessor.RequestContext.BundleIssues.Select(issue => issue.Diagnostics).ToList());
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -116,7 +116,7 @@ private IFhirRequestContext CreateRequestContextForBundleHandlerProcessing(Bundl
var fhirJsonParser = new FhirJsonParser();

ISearchService searchService = Substitute.For<ISearchService>();
var resourceReferenceResolver = new ResourceReferenceResolver(searchService, new QueryStringParser());
var resourceReferenceResolver = new ResourceReferenceResolver(searchService, new QueryStringParser(), Substitute.For<ILogger<ResourceReferenceResolver>>());

var transactionBundleValidatorLogger = Substitute.For<ILogger<TransactionBundleValidator>>();
var transactionBundleValidator = new TransactionBundleValidator(resourceReferenceResolver, transactionBundleValidatorLogger);
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -79,8 +79,10 @@ public BundleHandlerTests()
var fhirJsonSerializer = new FhirJsonSerializer();
var fhirJsonParser = new FhirJsonParser();

var loggerResourceReferenceResolver = Substitute.For<ILogger<ResourceReferenceResolver>>();

ISearchService searchService = Substitute.For<ISearchService>();
var resourceReferenceResolver = new ResourceReferenceResolver(searchService, new QueryStringParser());
var resourceReferenceResolver = new ResourceReferenceResolver(searchService, new QueryStringParser(), loggerResourceReferenceResolver);

var transactionBundleValidatorLogger = Substitute.For<ILogger<TransactionBundleValidator>>();
var transactionBundleValidator = new TransactionBundleValidator(resourceReferenceResolver, transactionBundleValidatorLogger);
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,6 @@
using System.Collections.Generic;
using System.Linq;
using System.Threading;
using Castle.Core.Logging;
using Microsoft.Extensions.Logging;
using Microsoft.Health.Fhir.Api.Features.Resources.Bundle;
using Microsoft.Health.Fhir.Api.Features.Routing;
Expand All @@ -31,12 +30,13 @@ public class TransactionBundleValidatorTests
{
private readonly ISearchService _searchService = Substitute.For<ISearchService>();
private readonly ILogger<TransactionBundleValidator> _logger = Substitute.For<ILogger<TransactionBundleValidator>>();
private readonly ILogger<ResourceReferenceResolver> _loggerResourceReferenceResolver = Substitute.For<ILogger<ResourceReferenceResolver>>();
private readonly TransactionBundleValidator _transactionBundleValidator;
private readonly Dictionary<string, (string resourceId, string resourceType)> _idDictionary;

public TransactionBundleValidatorTests()
{
_transactionBundleValidator = new TransactionBundleValidator(new ResourceReferenceResolver(_searchService, new QueryStringParser()), _logger);
_transactionBundleValidator = new TransactionBundleValidator(new ResourceReferenceResolver(_searchService, new QueryStringParser(), _loggerResourceReferenceResolver), _logger);
_idDictionary = new Dictionary<string, (string resourceId, string resourceType)>();
}

Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -10,6 +10,7 @@
using System.IO;
using System.Linq;
using System.Net;
using System.Text;
using System.Threading;
using System.Threading.Tasks;
using System.Transactions;
Expand All @@ -22,10 +23,7 @@
using Microsoft.AspNetCore.Http.Extensions;
using Microsoft.AspNetCore.Http.Features.Authentication;
using Microsoft.AspNetCore.Http.Headers;
using Microsoft.AspNetCore.Mvc.Infrastructure;
using Microsoft.AspNetCore.Mvc.Routing;
using Microsoft.AspNetCore.Routing;
using Microsoft.AspNetCore.Routing.Template;
using Microsoft.Extensions.Logging;
using Microsoft.Extensions.Options;
using Microsoft.Extensions.Primitives;
Expand Down Expand Up @@ -54,7 +52,6 @@
using Microsoft.Health.Fhir.Core.Messages.Bundle;
using Microsoft.Health.Fhir.Core.Models;
using Microsoft.Health.Fhir.ValueSets;
using SharpCompress.Common;
using static Hl7.Fhir.Model.Bundle;
using Task = System.Threading.Tasks.Task;

Expand Down Expand Up @@ -101,6 +98,16 @@ public partial class BundleHandler : IRequestHandler<BundleRequest, BundleRespon
/// </summary>
private static readonly string[] HeadersToAccumulate = new[] { KnownHeaders.RetryAfter, KnownHeaders.RetryAfterMilliseconds, "x-ms-session-token", "x-ms-request-charge" };

/// <summary>
/// Headers to propagate from the inner actions to the outer HTTP request.
fhibf marked this conversation as resolved.
Show resolved Hide resolved
/// </summary>
private static readonly string[] SuccessfullStatusCodeToAvoidAdditionalLogging = new[]
{
((int)HttpStatusCode.OK).ToString(),
((int)HttpStatusCode.Created).ToString(),
((int)HttpStatusCode.Accepted).ToString(),
};

/// <summary>
/// Properties to propagate from the outer HTTP requests to the inner actions.
/// </summary>
Expand Down Expand Up @@ -676,6 +683,8 @@ private async Task<EntryComponent> ExecuteRequestsWithSingleHttpVerbInSequenceAs

statistics.RegisterNewEntry(httpVerb, resourceContext.Index, entryComponent.Response.Status, watch.Elapsed);

LogFinalOperationOutcomeForFailedRecords(resourceContext.Index, entryComponent);

if (_bundleType.Equals(BundleType.Transaction) && entryComponent.Response.Outcome != null)
{
var errorMessage = string.Format(Api.Resources.TransactionFailed, resourceContext.Context.HttpContext.Request.Method, resourceContext.Context.HttpContext.Request.Path);
Expand Down Expand Up @@ -845,6 +854,46 @@ private static void SetupContexts(
}
}

private void LogFinalOperationOutcomeForFailedRecords(int index, EntryComponent entryComponent)
{
if (entryComponent?.Response?.Outcome == null)
{
return;
}

// If the result is a successful, no need to log the outcome for potential troubleshooting.
if (SuccessfullStatusCodeToAvoidAdditionalLogging.Contains(entryComponent.Response.Status))
{
return;
}

try
{
StringBuilder reason = new StringBuilder();
if (entryComponent.Response.Outcome is OperationOutcome operationOutcome && operationOutcome.Issue.Any())
{
foreach (OperationOutcome.IssueComponent issue in operationOutcome.Issue)
{
reason.AppendLine($"{issue.Severity} / {issue.Code} / {SanitizeString(issue.Diagnostics)}");
}
}
else
{
reason.Append("Reason is not defined.");
}

_logger.LogInformation(
"Throubleshoot Outcome {Index}: {HttpStatus}. Reason: {Reason}",
index,
entryComponent.Response.Status,
reason.ToString());
}
catch (Exception ex)
{
_logger.LogError(ex, $"Throubleshoot Outcome {index}: Error while logging the final operation outcome for failed records. This error will not block the bundle processing.");
}
Dismissed Show dismissed Hide dismissed
}

private void PopulateReferenceIdDictionary(IReadOnlyCollection<EntryComponent> bundleEntries, IDictionary<string, (string resourceId, string resourceType)> idDictionary)
{
foreach (EntryComponent entry in bundleEntries)
Expand Down Expand Up @@ -888,6 +937,14 @@ private static OperationOutcome CreateOperationOutcome(OperationOutcome.IssueSev
};
}

private static string SanitizeString(string input)
{
return input
.Replace(Environment.NewLine, string.Empty, StringComparison.OrdinalIgnoreCase)
.Replace("\r", string.Empty, StringComparison.OrdinalIgnoreCase)
.Replace("\n", string.Empty, StringComparison.OrdinalIgnoreCase);
fhibf marked this conversation as resolved.
Show resolved Hide resolved
}

private BundleHandlerStatistics CreateNewBundleHandlerStatistics(BundleProcessingLogic processingLogic)
{
BundleHandlerStatistics statistics = new BundleHandlerStatistics(_bundleType, processingLogic, _optimizedQuerySet, _requestCount);
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -8,15 +8,13 @@
using System.Linq;
using System.Net.Http;
using System.Threading;
using Castle.Core.Logging;
using Hl7.Fhir.ElementModel;
using Hl7.Fhir.Model;
using Hl7.Fhir.Serialization;
using MediatR;
using Microsoft.Extensions.DependencyInjection;
using Microsoft.Extensions.Logging;
using Microsoft.Extensions.Primitives;
using Microsoft.Health.Core.Features.Context;
using Microsoft.Health.Core.Features.Security.Authorization;
using Microsoft.Health.Extensions.DependencyInjection;
using Microsoft.Health.Fhir.Core.Exceptions;
Expand Down Expand Up @@ -114,7 +112,7 @@ public ResourceHandlerTests()

var contextAccessor = Substitute.For<FhirRequestContextAccessor>();
contextAccessor.RequestContext = new FhirRequestContext("method", "http://localhost", "http://localhost", "id", new Dictionary<string, StringValues>(), new Dictionary<string, StringValues>());
var referenceResolver = new ResourceReferenceResolver(_searchService, new TestQueryStringParser());
var referenceResolver = new ResourceReferenceResolver(_searchService, new TestQueryStringParser(), Substitute.For<ILogger<ResourceReferenceResolver>>());
_resourceIdProvider = new ResourceIdProvider();

var auditLogger = Substitute.For<IAuditLogger>();
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -8,6 +8,7 @@
using System.Linq;
using System.Threading;
using Hl7.Fhir.Model;
using Microsoft.Extensions.Logging;
using Microsoft.Health.Fhir.Core.Exceptions;
using Microsoft.Health.Fhir.Core.Extensions;
using Microsoft.Health.Fhir.Core.Features.Persistence;
Expand All @@ -32,7 +33,7 @@ public class ResourceReferenceResolverTests

public ResourceReferenceResolverTests()
{
_referenceResolver = new ResourceReferenceResolver(_searchService, new TestQueryStringParser());
_referenceResolver = new ResourceReferenceResolver(_searchService, new TestQueryStringParser(), Substitute.For<ILogger<ResourceReferenceResolver>>());
}

[Fact]
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -4,7 +4,6 @@
// -------------------------------------------------------------------------------------------------

using System;
using System.Collections.Generic;
using System.Globalization;
using System.Linq;
using System.Threading;
Expand Down Expand Up @@ -75,7 +74,7 @@ public async Task<TResponse> Handle(TRequest request, CancellationToken cancella
else
{
// Multiple matches: The server returns a 412 Precondition Failed error indicating the client's criteria were not selective enough
_logger.LogInformation("PreconditionFailed - Conditional handler: Multiple Matches Found. ResourceType={ResourceType}, NumberOfMatches={NumberOfMatches}", request.ResourceType, count);
_logger.LogInformation("PreconditionFailed: Conditional handler: Multiple Matches Found. ResourceType={ResourceType}, NumberOfMatches={NumberOfMatches}", request.ResourceType, count);
throw new PreconditionFailedException(string.Format(CultureInfo.InvariantCulture, Core.Resources.ConditionalOperationNotSelectiveEnough, request.ResourceType));
}
}
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -5,20 +5,22 @@

using System.Globalization;
using FluentValidation;
using Microsoft.Extensions.Logging;
using Microsoft.Health.Fhir.Core.Messages.Create;

namespace Microsoft.Health.Fhir.Core.Features.Resources.Create
{
[System.Diagnostics.CodeAnalysis.SuppressMessage("Naming", "CA1710:Identifiers should have correct suffix", Justification = "Follows validator naming convention.")]
public class ConditionalCreateResourceValidator : AbstractValidator<ConditionalCreateResourceRequest>
{
public ConditionalCreateResourceValidator()
public ConditionalCreateResourceValidator(ILogger<ConditionalCreateResourceValidator> logger)
{
RuleFor(x => x.ConditionalParameters)
.Custom((conditionalParameters, context) =>
{
if (conditionalParameters.Count == 0)
{
logger?.LogInformation("PreconditionFailed: ConditionalOperationNotSelectiveEnough");
context.AddFailure(string.Format(CultureInfo.InvariantCulture, Core.Resources.ConditionalOperationNotSelectiveEnough, context.InstanceToValidate.ResourceType));
}
});
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -6,6 +6,7 @@
using System.Globalization;
using EnsureThat;
using FluentValidation;
using Microsoft.Extensions.Logging;
using Microsoft.Extensions.Options;
using Microsoft.Health.Fhir.Core.Configs;
using Microsoft.Health.Fhir.Core.Messages.Delete;
Expand All @@ -16,7 +17,7 @@
[System.Diagnostics.CodeAnalysis.SuppressMessage("Naming", "CA1710:Identifiers should have correct suffix", Justification = "Follows validator naming convention.")]
public class ConditionalDeleteResourceValidator : AbstractValidator<ConditionalDeleteResourceRequest>
{
public ConditionalDeleteResourceValidator(IOptions<CoreFeatureConfiguration> configuration, IModelInfoProvider modelInfoProvider)
public ConditionalDeleteResourceValidator(IOptions<CoreFeatureConfiguration> configuration, IModelInfoProvider modelInfoProvider, ILogger<ConditionalDeleteResourceValidator> logger)
{
EnsureArg.IsNotNull(configuration?.Value, nameof(configuration));

Expand All @@ -29,12 +30,13 @@
{
if (conditionalParameters.Count == 0)
{
logger?.LogInformation("PreconditionFailed: ConditionalOperationNotSelectiveEnough");
context.AddFailure(string.Format(CultureInfo.InvariantCulture, Core.Resources.ConditionalOperationNotSelectiveEnough, context.InstanceToValidate.ResourceType));
}
});

RuleFor(x => x.MaxDeleteCount)
.InclusiveBetween(1, configuration.Value.ConditionalDeleteMaxItems)

Check warning

Code scanning / CodeQL

Dereferenced variable may be null Warning

Variable
configuration
may be null at this access as suggested by
this
null check.
.WithMessage(string.Format(CultureInfo.InvariantCulture, Core.Resources.ConditionalDeleteCountOutOfRange, 1, configuration.Value.ConditionalDeleteMaxItems));
}
}
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -127,7 +127,8 @@ public async Task<long> DeleteMultipleAsync(ConditionalDeleteResourceRequest req
cancellationToken,
request.DeleteAll ? searchCount : request.MaxDeleteCount,
versionType: request.VersionType,
onlyIds: true);
onlyIds: true,
logger: _logger);
}

long numDeleted = 0;
Expand Down Expand Up @@ -179,7 +180,8 @@ public async Task<long> DeleteMultipleAsync(ConditionalDeleteResourceRequest req
request.DeleteAll ? searchCount : (int)(request.MaxDeleteCount - numQueuedForDeletion),
ct,
request.VersionType,
onlyIds: true);
onlyIds: true,
logger: _logger);
}
}
else
Expand Down
Loading