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FASTA Format
The following information is from http://zhanglab.ccmb.med.umich.edu/FASTA/
"A sequence in FASTA format begins with a single-line description, followed by lines of sequence data. The description line is distinguished from the sequence data by a greater-than (">") symbol in the first column. It is recommended that all lines of text be shorter than 80 characters in length."
The accepted amino acid codes are:
| Code | Amino acid |
|---|---|
| A | ALA alanine |
| B | ASX aspartate or asparagine |
| C | CYS cystine |
| D | ASP aspartate |
| E | GLU glutamate |
| F | PHE phenylalanine |
| G | GLY glycine |
| H | HIS histidine |
| I | ILE isoleucine |
| K | LYS lysine |
| L | LEU leucine |
| M | MET methionine |
| N | ASN asparagine |
| P | PRO proline |
| Q | GLN glutamine |
| R | ARG arginine |
| S | SER serine |
| T | THR threonine |
| U | selenocysteine |
| V | VAL valine |
| W | TRP tryptophan |
| Y | TYR tyrosine |
| Z | GLX glutamate or glutamine |
| X | any |
| * | translation stop |
| - | gap of indeterminate length |
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