Version 0.3.1

Minor update to v0.3 software:

• New script write_starfile.py to save selected particles as a .star file for use in other tools
• Improvements to cryodrgn analyze

Version 0.3.0

• New: GPU parallelization with flag --multigpu
• New: Mode for accelerated mixed precision training with flag --amp, available for NVIDIA tensor core GPUs
• Interface update:
  • Renamed encoder arguments --qdim and --qlayers to --enc-dim and --enc-layers
  • Renamed decoder arguments --pdim and --players to --dec-dim and --dec-layers
• Argument default changes:
  • Flipped the default for --invert-data to True by default
  • Flipped the default for --window to True by default
• Updated training recommendations in below quick start guide
• Updates to cryodrgn analyze
  • More visualizations
  • Order kmeans volumes according to distances in latent space (previously random)
  • More features for particle selection and filtering in the Jupiter notebook