TEST-#1891: use conda instead of pip #2056

anmyachev · 2020-09-09T16:29:27Z

Signed-off-by: Anatoly Myachev anatoly.myachev@intel.com

What do these changes do?

commit message follows format outlined here
passes flake8 modin
passes black --check modin
signed commit with git commit -s
Resolves Use Conda to create environment in TeamCity #1891
tests added and passing

codecov · 2020-09-09T16:43:34Z

Codecov Report

Merging #2056 into master will decrease coverage by 0.21%.
The diff coverage is n/a.

@@            Coverage Diff             @@
##           master    #2056      +/-   ##
==========================================
- Coverage   82.20%   81.98%   -0.22%     
==========================================
  Files          79       79              
  Lines        9579     9581       +2     
==========================================
- Hits         7874     7855      -19     
- Misses       1705     1726      +21

Impacted Files	Coverage Δ
...gines/ray/pandas_on_ray/frame/partition_manager.py	`57.14% <0.00%> (-38.78%)`	⬇️
modin/engines/ray/pandas_on_ray/frame/partition.py	`93.47% <0.00%> (-1.09%)`	⬇️
modin/backends/pandas/query_compiler.py	`96.57% <0.00%> (-0.31%)`	⬇️
modin/pandas/groupby.py	`87.53% <0.00%> (ø)`
modin/pandas/base.py	`94.43% <0.00%> (+<0.01%)`	⬆️
modin/pandas/dataframe.py	`90.43% <0.00%> (+0.01%)`	⬆️
modin/engines/base/io/file_reader.py	`93.47% <0.00%> (+1.08%)`	⬆️
modin/experimental/cloud/meta_magic.py	`85.18% <0.00%> (+1.85%)`	⬆️

Continue to review full report at Codecov.

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Signed-off-by: Anatoly Myachev <anatoly.myachev@intel.com>

modin-bot · 2020-09-09T19:16:34Z

TeamCity Python test results bot

Tests FAILed

Tests Logs

============================= test session starts ==============================
platform linux -- Python 3.8.5, pytest-6.0.1, py-1.9.0, pluggy-0.13.1
rootdir: /modin, configfile: setup.cfg
plugins: cov-2.10.1, forked-1.2.0, xdist-2.1.0
collected 113 items

modin/pandas/test/test_io.py .................sX..........s............. [ 38%]
........s...........................s..s.X.....s..................ss..   [100%]

----------- coverage: platform linux, python 3.8.5-final-0 -----------
Coverage XML written to file coverage.xml


=========== 103 passed, 8 skipped, 2 xpassed, 127 warnings in 39.62s ===========
Closing remaining open files:test_write_modin.hdf...donetest_write_pandas.hdf...done
============================= test session starts ==============================
platform linux -- Python 3.8.5, pytest-6.0.1, py-1.9.0, pluggy-0.13.1
rootdir: /modin, configfile: setup.cfg
plugins: cov-2.10.1, forked-1.2.0, xdist-2.1.0
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=================================== FAILURES ===================================
___________________________ test_dot[float_nan_data] ___________________________
[gw25] linux -- Python 3.8.5 /opt/conda/envs/modin/bin/python
Traceback (most recent call last):
  File "/modin/modin/pandas/test/dataframe/test_default.py", line 256, in test_dot
    df_equals(modin_result, pandas_result)
  File "/modin/modin/pandas/test/utils.py", line 499, in df_equals
    assert_frame_equal(
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/pandas/_testing.py", line 1372, in assert_frame_equal
    assert_series_equal(
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/pandas/_testing.py", line 1166, in assert_series_equal
    assert_numpy_array_equal(
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/pandas/_testing.py", line 988, in assert_numpy_array_equal
    _raise(left, right, err_msg)
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/pandas/_testing.py", line 982, in _raise
    raise_assert_detail(obj, msg, left, right)
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/pandas/_testing.py", line 915, in raise_assert_detail
    raise AssertionError(msg)
AssertionError: numpy array are different

numpy array values are different (14.0625 %)
[left]:  [nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 208522.99333004752, nan, nan, nan, 169925.49188354774, nan, nan, nan, 174915.36390615976, nan, nan, nan, nan, nan, nan, nan, 161308.85326789052, nan, nan, nan, 181923.07513736383, nan, nan, nan, 154073.23239069094, nan, nan, nan, nan, nan, nan, nan, 174013.7570578492, nan, nan, nan, 155110.9947310862, nan, nan, nan, 144217.41057075313, nan, nan, nan, nan, nan, nan, nan, 153804.73508983105, nan, nan, nan, 164128.9495456427, nan, nan, nan, 168986.39047641007, nan, nan, nan, nan, nan, nan, nan, ...]
[right]: [nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 208522.99333004744, nan, nan, nan, 169925.49188354774, nan, nan, nan, 174915.3639061598, nan, nan, nan, nan, nan, nan, nan, 161308.8532678905, nan, nan, nan, 181923.07513736378, nan, nan, nan, 154073.2323906909, nan, nan, nan, nan, nan, nan, nan, 174013.7570578493, nan, nan, nan, 155110.9947310862, nan, nan, nan, 144217.4105707531, nan, nan, nan, nan, nan, nan, nan, 153804.73508983103, nan, nan, nan, 164128.9495456428, nan, nan, nan, 168986.39047641004, nan, nan, nan, nan, nan, nan, nan, ...]
_________________________ test_matmul[float_nan_data] __________________________
[gw25] linux -- Python 3.8.5 /opt/conda/envs/modin/bin/python
Traceback (most recent call last):
  File "/modin/modin/pandas/test/dataframe/test_default.py", line 307, in test_matmul
    df_equals(modin_result, pandas_result)
  File "/modin/modin/pandas/test/utils.py", line 499, in df_equals
    assert_frame_equal(
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/pandas/_testing.py", line 1372, in assert_frame_equal
    assert_series_equal(
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/pandas/_testing.py", line 1166, in assert_series_equal
    assert_numpy_array_equal(
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/pandas/_testing.py", line 988, in assert_numpy_array_equal
    _raise(left, right, err_msg)
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/pandas/_testing.py", line 982, in _raise
    raise_assert_detail(obj, msg, left, right)
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/pandas/_testing.py", line 915, in raise_assert_detail
    raise AssertionError(msg)
AssertionError: numpy array are different

numpy array values are different (14.0625 %)
[left]:  [nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 208522.99333004752, nan, nan, nan, 169925.49188354774, nan, nan, nan, 174915.36390615976, nan, nan, nan, nan, nan, nan, nan, 161308.85326789052, nan, nan, nan, 181923.07513736383, nan, nan, nan, 154073.23239069094, nan, nan, nan, nan, nan, nan, nan, 174013.7570578492, nan, nan, nan, 155110.9947310862, nan, nan, nan, 144217.41057075313, nan, nan, nan, nan, nan, nan, nan, 153804.73508983105, nan, nan, nan, 164128.9495456427, nan, nan, nan, 168986.39047641007, nan, nan, nan, nan, nan, nan, nan, ...]
[right]: [nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 208522.99333004744, nan, nan, nan, 169925.49188354774, nan, nan, nan, 174915.3639061598, nan, nan, nan, nan, nan, nan, nan, 161308.8532678905, nan, nan, nan, 181923.07513736378, nan, nan, nan, 154073.2323906909, nan, nan, nan, nan, nan, nan, nan, 174013.7570578493, nan, nan, nan, 155110.9947310862, nan, nan, nan, 144217.4105707531, nan, nan, nan, nan, nan, nan, nan, 153804.73508983103, nan, nan, nan, 164128.9495456428, nan, nan, nan, 168986.39047641004, nan, nan, nan, nan, nan, nan, nan, ...]

----------- coverage: platform linux, python 3.8.5-final-0 -----------
Coverage XML written to file coverage.xml

=========================== short test summary info ============================
FAILED modin/pandas/test/dataframe/test_default.py::test_dot[float_nan_data]
FAILED modin/pandas/test/dataframe/test_default.py::test_matmul[float_nan_data]
= 2 failed, 5000 passed, 69 skipped, 176 xfailed, 152 xpassed, 9516 warnings in 67.28s (0:01:07) =
============================= test session starts ==============================
platform linux -- Python 3.8.5, pytest-6.0.1, py-1.9.0, pluggy-0.13.1
rootdir: /modin, configfile: setup.cfg
plugins: cov-2.10.1, forked-1.2.0, xdist-2.1.0
collected 113 items

modin/pandas/test/test_io.py .................sX..........s............. [ 38%]
........s...........................s..s.X.....s..................ss..   [100%]

----------- coverage: platform linux, python 3.8.5-final-0 -----------
Coverage XML written to file coverage.xml


=========== 103 passed, 8 skipped, 2 xpassed, 127 warnings in 39.62s ===========
Closing remaining open files:test_write_modin.hdf...donetest_write_pandas.hdf...done
============================= test session starts ==============================
platform linux -- Python 3.8.5, pytest-6.0.1, py-1.9.0, pluggy-0.13.1
rootdir: /modin, configfile: setup.cfg
plugins: cov-2.10.1, forked-1.2.0, xdist-2.1.0
gw0 I / gw1 I / gw2 I / gw3 I / gw4 I / gw5 I / gw6 I / gw7 I / gw8 I / gw9 I / gw10 I / gw11 I / gw12 I / gw13 I / gw14 I / gw15 I / gw16 I / gw17 I / gw18 I / gw19 I / gw20 I / gw21 I / gw22 I / gw23 I / gw24 I / gw25 I / gw26 I / gw27 I / gw28 I / gw29 I / gw30 I / gw31 I / gw32 I / gw33 I / gw34 I / gw35 I / gw36 I / gw37 I / gw38 I / gw39 I / gw40 I / gw41 I / gw42 I / gw43 I / gw44 I / gw45 I / gw46 I / gw47 I
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=================================== FAILURES ===================================
___________________________ test_dot[float_nan_data] ___________________________
[gw25] linux -- Python 3.8.5 /opt/conda/envs/modin/bin/python
Traceback (most recent call last):
  File "/modin/modin/pandas/test/dataframe/test_default.py", line 256, in test_dot
    df_equals(modin_result, pandas_result)
  File "/modin/modin/pandas/test/utils.py", line 499, in df_equals
    assert_frame_equal(
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/pandas/_testing.py", line 1372, in assert_frame_equal
    assert_series_equal(
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/pandas/_testing.py", line 1166, in assert_series_equal
    assert_numpy_array_equal(
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/pandas/_testing.py", line 988, in assert_numpy_array_equal
    _raise(left, right, err_msg)
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/pandas/_testing.py", line 982, in _raise
    raise_assert_detail(obj, msg, left, right)
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/pandas/_testing.py", line 915, in raise_assert_detail
    raise AssertionError(msg)
AssertionError: numpy array are different

numpy array values are different (14.0625 %)
[left]:  [nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 208522.99333004752, nan, nan, nan, 169925.49188354774, nan, nan, nan, 174915.36390615976, nan, nan, nan, nan, nan, nan, nan, 161308.85326789052, nan, nan, nan, 181923.07513736383, nan, nan, nan, 154073.23239069094, nan, nan, nan, nan, nan, nan, nan, 174013.7570578492, nan, nan, nan, 155110.9947310862, nan, nan, nan, 144217.41057075313, nan, nan, nan, nan, nan, nan, nan, 153804.73508983105, nan, nan, nan, 164128.9495456427, nan, nan, nan, 168986.39047641007, nan, nan, nan, nan, nan, nan, nan, ...]
[right]: [nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 208522.99333004744, nan, nan, nan, 169925.49188354774, nan, nan, nan, 174915.3639061598, nan, nan, nan, nan, nan, nan, nan, 161308.8532678905, nan, nan, nan, 181923.07513736378, nan, nan, nan, 154073.2323906909, nan, nan, nan, nan, nan, nan, nan, 174013.7570578493, nan, nan, nan, 155110.9947310862, nan, nan, nan, 144217.4105707531, nan, nan, nan, nan, nan, nan, nan, 153804.73508983103, nan, nan, nan, 164128.9495456428, nan, nan, nan, 168986.39047641004, nan, nan, nan, nan, nan, nan, nan, ...]
_________________________ test_matmul[float_nan_data] __________________________
[gw25] linux -- Python 3.8.5 /opt/conda/envs/modin/bin/python
Traceback (most recent call last):
  File "/modin/modin/pandas/test/dataframe/test_default.py", line 307, in test_matmul
    df_equals(modin_result, pandas_result)
  File "/modin/modin/pandas/test/utils.py", line 499, in df_equals
    assert_frame_equal(
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/pandas/_testing.py", line 1372, in assert_frame_equal
    assert_series_equal(
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/pandas/_testing.py", line 1166, in assert_series_equal
    assert_numpy_array_equal(
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/pandas/_testing.py", line 988, in assert_numpy_array_equal
    _raise(left, right, err_msg)
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/pandas/_testing.py", line 982, in _raise
    raise_assert_detail(obj, msg, left, right)
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/pandas/_testing.py", line 915, in raise_assert_detail
    raise AssertionError(msg)
AssertionError: numpy array are different

numpy array values are different (14.0625 %)
[left]:  [nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 208522.99333004752, nan, nan, nan, 169925.49188354774, nan, nan, nan, 174915.36390615976, nan, nan, nan, nan, nan, nan, nan, 161308.85326789052, nan, nan, nan, 181923.07513736383, nan, nan, nan, 154073.23239069094, nan, nan, nan, nan, nan, nan, nan, 174013.7570578492, nan, nan, nan, 155110.9947310862, nan, nan, nan, 144217.41057075313, nan, nan, nan, nan, nan, nan, nan, 153804.73508983105, nan, nan, nan, 164128.9495456427, nan, nan, nan, 168986.39047641007, nan, nan, nan, nan, nan, nan, nan, ...]
[right]: [nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, nan, 208522.99333004744, nan, nan, nan, 169925.49188354774, nan, nan, nan, 174915.3639061598, nan, nan, nan, nan, nan, nan, nan, 161308.8532678905, nan, nan, nan, 181923.07513736378, nan, nan, nan, 154073.2323906909, nan, nan, nan, nan, nan, nan, nan, 174013.7570578493, nan, nan, nan, 155110.9947310862, nan, nan, nan, 144217.4105707531, nan, nan, nan, nan, nan, nan, nan, 153804.73508983103, nan, nan, nan, 164128.9495456428, nan, nan, nan, 168986.39047641004, nan, nan, nan, nan, nan, nan, nan, ...]

----------- coverage: platform linux, python 3.8.5-final-0 -----------
Coverage XML written to file coverage.xml

=========================== short test summary info ============================
FAILED modin/pandas/test/dataframe/test_default.py::test_dot[float_nan_data]
FAILED modin/pandas/test/dataframe/test_default.py::test_matmul[float_nan_data]
= 2 failed, 5000 passed, 69 skipped, 176 xfailed, 152 xpassed, 9516 warnings in 67.28s (0:01:07) =

modin-bot · 2020-09-09T19:50:10Z

TeamCity Dask test results bot

Tests PASSed

Tests Logs

============================= test session starts ==============================
platform linux -- Python 3.8.5, pytest-6.0.1, py-1.9.0, pluggy-0.13.1
rootdir: /modin, configfile: setup.cfg
plugins: cov-2.10.1, forked-1.2.0, xdist-2.1.0
collected 113 items

modin/pandas/test/test_io.py .................sx..........s............. [ 38%]
....................................s..s.X.....s..................ss..   [100%]

----------- coverage: platform linux, python 3.8.5-final-0 -----------
Coverage XML written to file coverage.xml


= 104 passed, 7 skipped, 1 xfailed, 1 xpassed, 107 warnings in 99.73s (0:01:39) =
Closing remaining open files:test_write_modin.hdf...donetest_write_pandas.hdf...done
============================= test session starts ==============================
platform linux -- Python 3.8.5, pytest-6.0.1, py-1.9.0, pluggy-0.13.1
rootdir: /modin, configfile: setup.cfg
plugins: cov-2.10.1, forked-1.2.0, xdist-2.1.0
gw0 I / gw1 I / gw2 I / gw3 I / gw4 I / gw5 I / gw6 I / gw7 I / gw8 I / gw9 I / gw10 I / gw11 I / gw12 I / gw13 I / gw14 I / gw15 I / gw16 I / gw17 I / gw18 I / gw19 I / gw20 I / gw21 I / gw22 I / gw23 I / gw24 I / gw25 I / gw26 I / gw27 I / gw28 I / gw29 I / gw30 I / gw31 I / gw32 I / gw33 I / gw34 I / gw35 I / gw36 I / gw37 I / gw38 I / gw39 I / gw40 I / gw41 I / gw42 I / gw43 I / gw44 I / gw45 I / gw46 I / gw47 I
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..............................................................           [100%]--- Logging error ---
Traceback (most recent call last):
  File "/opt/conda/envs/modin/lib/python3.8/logging/__init__.py", line 1084, in emit
    stream.write(msg + self.terminator)
ValueError: I/O operation on closed file.
Call stack:
  File "/opt/conda/envs/modin/lib/python3.8/threading.py", line 890, in _bootstrap
    self._bootstrap_inner()
  File "/opt/conda/envs/modin/lib/python3.8/threading.py", line 932, in _bootstrap_inner
    self.run()
  File "/opt/conda/envs/modin/lib/python3.8/threading.py", line 870, in run
    self._target(*self._args, **self._kwargs)
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/distributed/utils.py", line 418, in run_loop
    loop.start()
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/tornado/platform/asyncio.py", line 149, in start
    self.asyncio_loop.run_forever()
  File "/opt/conda/envs/modin/lib/python3.8/asyncio/base_events.py", line 570, in run_forever
    self._run_once()
  File "/opt/conda/envs/modin/lib/python3.8/asyncio/base_events.py", line 1859, in _run_once
    handle._run()
  File "/opt/conda/envs/modin/lib/python3.8/asyncio/events.py", line 81, in _run
    self._context.run(self._callback, *self._args)
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/distributed/nanny.py", line 456, in _on_exit
    logger.warning("Restarting worker")
Message: 'Restarting worker'
Arguments: ()
--- Logging error ---
Traceback (most recent call last):
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/distributed/nanny.py", line 575, in start
    await self.process.start()
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/distributed/process.py", line 34, in _call_and_set_future
    res = func(*args, **kwargs)
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/distributed/process.py", line 202, in _start
    process.start()
  File "/opt/conda/envs/modin/lib/python3.8/multiprocessing/process.py", line 121, in start
    self._popen = self._Popen(self)
  File "/opt/conda/envs/modin/lib/python3.8/multiprocessing/context.py", line 284, in _Popen
    return Popen(process_obj)
  File "/opt/conda/envs/modin/lib/python3.8/multiprocessing/popen_spawn_posix.py", line 32, in __init__
    super().__init__(process_obj)
  File "/opt/conda/envs/modin/lib/python3.8/multiprocessing/popen_fork.py", line 19, in __init__
    self._launch(process_obj)
  File "/opt/conda/envs/modin/lib/python3.8/multiprocessing/popen_spawn_posix.py", line 47, in _launch
    reduction.dump(process_obj, fp)
  File "/opt/conda/envs/modin/lib/python3.8/multiprocessing/reduction.py", line 60, in dump
    ForkingPickler(file, protocol).dump(obj)
  File "/opt/conda/envs/modin/lib/python3.8/multiprocessing/connection.py", line 968, in reduce_connection
    df = reduction.DupFd(conn.fileno())
  File "/opt/conda/envs/modin/lib/python3.8/multiprocessing/connection.py", line 170, in fileno
    self._check_closed()
  File "/opt/conda/envs/modin/lib/python3.8/multiprocessing/connection.py", line 136, in _check_closed
    raise OSError("handle is closed")
OSError: handle is closed

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/opt/conda/envs/modin/lib/python3.8/logging/__init__.py", line 1084, in emit
    stream.write(msg + self.terminator)
ValueError: I/O operation on closed file.
Call stack:
  File "/opt/conda/envs/modin/lib/python3.8/threading.py", line 890, in _bootstrap
    self._bootstrap_inner()
  File "/opt/conda/envs/modin/lib/python3.8/threading.py", line 932, in _bootstrap_inner
    self.run()
  File "/opt/conda/envs/modin/lib/python3.8/threading.py", line 870, in run
    self._target(*self._args, **self._kwargs)
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/distributed/utils.py", line 418, in run_loop
    loop.start()
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/tornado/platform/asyncio.py", line 149, in start
    self.asyncio_loop.run_forever()
  File "/opt/conda/envs/modin/lib/python3.8/asyncio/base_events.py", line 570, in run_forever
    self._run_once()
  File "/opt/conda/envs/modin/lib/python3.8/asyncio/base_events.py", line 1859, in _run_once
    handle._run()
  File "/opt/conda/envs/modin/lib/python3.8/asyncio/events.py", line 81, in _run
    self._context.run(self._callback, *self._args)
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/distributed/nanny.py", line 577, in start
    logger.exception("Nanny failed to start process", exc_info=True)
Message: 'Nanny failed to start process'
Arguments: ()


----------- coverage: platform linux, python 3.8.5-final-0 -----------
Coverage XML written to file coverage.xml

= 5002 passed, 69 skipped, 176 xfailed, 152 xpassed, 9502 warnings in 176.01s (0:02:56) =
============================= test session starts ==============================
platform linux -- Python 3.8.5, pytest-6.0.1, py-1.9.0, pluggy-0.13.1
rootdir: /modin, configfile: setup.cfg
plugins: cov-2.10.1, forked-1.2.0, xdist-2.1.0
collected 113 items

modin/pandas/test/test_io.py .................sx..........s............. [ 38%]
....................................s..s.X.....s..................ss..   [100%]

----------- coverage: platform linux, python 3.8.5-final-0 -----------
Coverage XML written to file coverage.xml


= 104 passed, 7 skipped, 1 xfailed, 1 xpassed, 107 warnings in 99.73s (0:01:39) =
Closing remaining open files:test_write_modin.hdf...donetest_write_pandas.hdf...done
============================= test session starts ==============================
platform linux -- Python 3.8.5, pytest-6.0.1, py-1.9.0, pluggy-0.13.1
rootdir: /modin, configfile: setup.cfg
plugins: cov-2.10.1, forked-1.2.0, xdist-2.1.0
gw0 I / gw1 I / gw2 I / gw3 I / gw4 I / gw5 I / gw6 I / gw7 I / gw8 I / gw9 I / gw10 I / gw11 I / gw12 I / gw13 I / gw14 I / gw15 I / gw16 I / gw17 I / gw18 I / gw19 I / gw20 I / gw21 I / gw22 I / gw23 I / gw24 I / gw25 I / gw26 I / gw27 I / gw28 I / gw29 I / gw30 I / gw31 I / gw32 I / gw33 I / gw34 I / gw35 I / gw36 I / gw37 I / gw38 I / gw39 I / gw40 I / gw41 I / gw42 I / gw43 I / gw44 I / gw45 I / gw46 I / gw47 I
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..............................................................           [100%]--- Logging error ---
Traceback (most recent call last):
  File "/opt/conda/envs/modin/lib/python3.8/logging/__init__.py", line 1084, in emit
    stream.write(msg + self.terminator)
ValueError: I/O operation on closed file.
Call stack:
  File "/opt/conda/envs/modin/lib/python3.8/threading.py", line 890, in _bootstrap
    self._bootstrap_inner()
  File "/opt/conda/envs/modin/lib/python3.8/threading.py", line 932, in _bootstrap_inner
    self.run()
  File "/opt/conda/envs/modin/lib/python3.8/threading.py", line 870, in run
    self._target(*self._args, **self._kwargs)
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/distributed/utils.py", line 418, in run_loop
    loop.start()
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/tornado/platform/asyncio.py", line 149, in start
    self.asyncio_loop.run_forever()
  File "/opt/conda/envs/modin/lib/python3.8/asyncio/base_events.py", line 570, in run_forever
    self._run_once()
  File "/opt/conda/envs/modin/lib/python3.8/asyncio/base_events.py", line 1859, in _run_once
    handle._run()
  File "/opt/conda/envs/modin/lib/python3.8/asyncio/events.py", line 81, in _run
    self._context.run(self._callback, *self._args)
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/distributed/nanny.py", line 456, in _on_exit
    logger.warning("Restarting worker")
Message: 'Restarting worker'
Arguments: ()
--- Logging error ---
Traceback (most recent call last):
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/distributed/nanny.py", line 575, in start
    await self.process.start()
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/distributed/process.py", line 34, in _call_and_set_future
    res = func(*args, **kwargs)
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/distributed/process.py", line 202, in _start
    process.start()
  File "/opt/conda/envs/modin/lib/python3.8/multiprocessing/process.py", line 121, in start
    self._popen = self._Popen(self)
  File "/opt/conda/envs/modin/lib/python3.8/multiprocessing/context.py", line 284, in _Popen
    return Popen(process_obj)
  File "/opt/conda/envs/modin/lib/python3.8/multiprocessing/popen_spawn_posix.py", line 32, in __init__
    super().__init__(process_obj)
  File "/opt/conda/envs/modin/lib/python3.8/multiprocessing/popen_fork.py", line 19, in __init__
    self._launch(process_obj)
  File "/opt/conda/envs/modin/lib/python3.8/multiprocessing/popen_spawn_posix.py", line 47, in _launch
    reduction.dump(process_obj, fp)
  File "/opt/conda/envs/modin/lib/python3.8/multiprocessing/reduction.py", line 60, in dump
    ForkingPickler(file, protocol).dump(obj)
  File "/opt/conda/envs/modin/lib/python3.8/multiprocessing/connection.py", line 968, in reduce_connection
    df = reduction.DupFd(conn.fileno())
  File "/opt/conda/envs/modin/lib/python3.8/multiprocessing/connection.py", line 170, in fileno
    self._check_closed()
  File "/opt/conda/envs/modin/lib/python3.8/multiprocessing/connection.py", line 136, in _check_closed
    raise OSError("handle is closed")
OSError: handle is closed

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/opt/conda/envs/modin/lib/python3.8/logging/__init__.py", line 1084, in emit
    stream.write(msg + self.terminator)
ValueError: I/O operation on closed file.
Call stack:
  File "/opt/conda/envs/modin/lib/python3.8/threading.py", line 890, in _bootstrap
    self._bootstrap_inner()
  File "/opt/conda/envs/modin/lib/python3.8/threading.py", line 932, in _bootstrap_inner
    self.run()
  File "/opt/conda/envs/modin/lib/python3.8/threading.py", line 870, in run
    self._target(*self._args, **self._kwargs)
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/distributed/utils.py", line 418, in run_loop
    loop.start()
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/tornado/platform/asyncio.py", line 149, in start
    self.asyncio_loop.run_forever()
  File "/opt/conda/envs/modin/lib/python3.8/asyncio/base_events.py", line 570, in run_forever
    self._run_once()
  File "/opt/conda/envs/modin/lib/python3.8/asyncio/base_events.py", line 1859, in _run_once
    handle._run()
  File "/opt/conda/envs/modin/lib/python3.8/asyncio/events.py", line 81, in _run
    self._context.run(self._callback, *self._args)
  File "/opt/conda/envs/modin/lib/python3.8/site-packages/distributed/nanny.py", line 577, in start
    logger.exception("Nanny failed to start process", exc_info=True)
Message: 'Nanny failed to start process'
Arguments: ()


----------- coverage: platform linux, python 3.8.5-final-0 -----------
Coverage XML written to file coverage.xml

= 5002 passed, 69 skipped, 176 xfailed, 152 xpassed, 9502 warnings in 176.01s (0:02:56) =

modin-bot · 2020-09-09T19:53:43Z

TeamCity Ray test results bot

Tests PASSed

Tests Logs

============================= test session starts ==============================
platform linux -- Python 3.8.5, pytest-6.0.1, py-1.9.0, pluggy-0.13.1
rootdir: /modin, configfile: setup.cfg
plugins: cov-2.10.1, forked-1.2.0, xdist-2.1.0
collected 113 items

modin/pandas/test/test_io.py .................sx..........s............. [ 38%]
....................................s..s.X.....s..................ss..   [100%]

----------- coverage: platform linux, python 3.8.5-final-0 -----------
Coverage XML written to file coverage.xml


= 104 passed, 7 skipped, 1 xfailed, 1 xpassed, 95 warnings in 77.64s (0:01:17) =
Closing remaining open files:test_write_modin.hdf...donetest_write_pandas.hdf...done
============================= test session starts ==============================
platform linux -- Python 3.8.5, pytest-6.0.1, py-1.9.0, pluggy-0.13.1
rootdir: /modin, configfile: setup.cfg
plugins: cov-2.10.1, forked-1.2.0, xdist-2.1.0
gw0 I / gw1 I / gw2 I / gw3 I / gw4 I / gw5 I / gw6 I / gw7 I / gw8 I / gw9 I / gw10 I / gw11 I / gw12 I / gw13 I / gw14 I / gw15 I / gw16 I / gw17 I / gw18 I / gw19 I / gw20 I / gw21 I / gw22 I / gw23 I / gw24 I / gw25 I / gw26 I / gw27 I / gw28 I / gw29 I / gw30 I / gw31 I / gw32 I / gw33 I / gw34 I / gw35 I / gw36 I / gw37 I / gw38 I / gw39 I / gw40 I / gw41 I / gw42 I / gw43 I / gw44 I / gw45 I / gw46 I / gw47 I
gw0 [5399] / gw1 [5399] / gw2 [5399] / gw3 [5399] / gw4 [5399] / gw5 [5399] / gw6 [5399] / gw7 [5399] / gw8 [5399] / gw9 [5399] / gw10 [5399] / gw11 [5399] / gw12 [5399] / gw13 [5399] / gw14 [5399] / gw15 [5399] / gw16 [5399] / gw17 [5399] / gw18 [5399] / gw19 [5399] / gw20 [5399] / gw21 [5399] / gw22 [5399] / gw23 [5399] / gw24 [5399] / gw25 [5399] / gw26 [5399] / gw27 [5399] / gw28 [5399] / gw29 [5399] / gw30 [5399] / gw31 [5399] / gw32 [5399] / gw33 [5399] / gw34 [5399] / gw35 [5399] / gw36 [5399] / gw37 [5399] / gw38 [5399] / gw39 [5399] / gw40 [5399] / gw41 [5399] / gw42 [5399] / gw43 [5399] / gw44 [5399] / gw45 [5399] / gw46 [5399] / gw47 [5399]

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...x.�[2m�[36m(pid=9366)�[0m error: object directory /localdisk/tc_agent/system/git/git-CE4319E5.git/objects does not exist; check .git/objects/info/alternates.
..............................X..x................s................ [ 12%]
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.........................xX......................x..x..............�[2m�[36m(pid=9667)�[0m error: object directory /localdisk/tc_agent/system/git/git-CE4319E5.git/objects does not exist; check .git/objects/info/alternates.
�[2m�[36m(pid=9667)�[0m fatal: bad object HEAD
x.x.. [ 14%]
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...x....x...x..�[2m�[36m(pid=9820)�[0m error: object directory /localdisk/tc_agent/system/git/git-CE4319E5.git/objects does not exist; check .git/objects/info/alternates...X...X.XxX....x.X...Xx.......x...x..x..........x...x.... [ 17%]
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�[2m�[36m(pid=10346)�[0m fatal: bad object HEAD
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...�[2m�[36m(pid=10348)�[0m error: object directory /localdisk/tc_agent/system/git/git-CE4319E5.git/objects does not exist; check .git/objects/info/alternates.
�[2m�[36m(pid=10348)�[0m fatal: bad object HEAD
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..................x.....s.....X......X......XXX.........XX.....X.X..X..X [ 81%]
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X.......X.....X............X.X.....X.X.............................X.... [ 84%]
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...........................................................              [100%]

----------- coverage: platform linux, python 3.8.5-final-0 -----------
Coverage XML written to file coverage.xml

= 5002 passed, 69 skipped, 176 xfailed, 152 xpassed, 9467 warnings in 77.47s (0:01:17) =
============================= test session starts ==============================
platform linux -- Python 3.8.5, pytest-6.0.1, py-1.9.0, pluggy-0.13.1
rootdir: /modin, configfile: setup.cfg
plugins: cov-2.10.1, forked-1.2.0, xdist-2.1.0
collected 113 items

modin/pandas/test/test_io.py .................sx..........s............. [ 38%]
....................................s..s.X.....s..................ss..   [100%]

----------- coverage: platform linux, python 3.8.5-final-0 -----------
Coverage XML written to file coverage.xml


= 104 passed, 7 skipped, 1 xfailed, 1 xpassed, 95 warnings in 77.64s (0:01:17) =
Closing remaining open files:test_write_modin.hdf...donetest_write_pandas.hdf...done
============================= test session starts ==============================
platform linux -- Python 3.8.5, pytest-6.0.1, py-1.9.0, pluggy-0.13.1
rootdir: /modin, configfile: setup.cfg
plugins: cov-2.10.1, forked-1.2.0, xdist-2.1.0
gw0 I / gw1 I / gw2 I / gw3 I / gw4 I / gw5 I / gw6 I / gw7 I / gw8 I / gw9 I / gw10 I / gw11 I / gw12 I / gw13 I / gw14 I / gw15 I / gw16 I / gw17 I / gw18 I / gw19 I / gw20 I / gw21 I / gw22 I / gw23 I / gw24 I / gw25 I / gw26 I / gw27 I / gw28 I / gw29 I / gw30 I / gw31 I / gw32 I / gw33 I / gw34 I / gw35 I / gw36 I / gw37 I / gw38 I / gw39 I / gw40 I / gw41 I / gw42 I / gw43 I / gw44 I / gw45 I / gw46 I / gw47 I
gw0 [5399] / gw1 [5399] / gw2 [5399] / gw3 [5399] / gw4 [5399] / gw5 [5399] / gw6 [5399] / gw7 [5399] / gw8 [5399] / gw9 [5399] / gw10 [5399] / gw11 [5399] / gw12 [5399] / gw13 [5399] / gw14 [5399] / gw15 [5399] / gw16 [5399] / gw17 [5399] / gw18 [5399] / gw19 [5399] / gw20 [5399] / gw21 [5399] / gw22 [5399] / gw23 [5399] / gw24 [5399] / gw25 [5399] / gw26 [5399] / gw27 [5399] / gw28 [5399] / gw29 [5399] / gw30 [5399] / gw31 [5399] / gw32 [5399] / gw33 [5399] / gw34 [5399] / gw35 [5399] / gw36 [5399] / gw37 [5399] / gw38 [5399] / gw39 [5399] / gw40 [5399] / gw41 [5399] / gw42 [5399] / gw43 [5399] / gw44 [5399] / gw45 [5399] / gw46 [5399] / gw47 [5399]

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�[2m�[36m(pid=9667)�[0m fatal: bad object HEAD
x.x.. [ 14%]
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...x....x...x..�[2m�[36m(pid=9820)�[0m error: object directory /localdisk/tc_agent/system/git/git-CE4319E5.git/objects does not exist; check .git/objects/info/alternates...X...X.XxX....x.X...Xx.......x...x..x..........x...x.... [ 17%]
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�[2m�[36m(pid=10346)�[0m fatal: bad object HEAD
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...�[2m�[36m(pid=10348)�[0m error: object directory /localdisk/tc_agent/system/git/git-CE4319E5.git/objects does not exist; check .git/objects/info/alternates.
�[2m�[36m(pid=10348)�[0m fatal: bad object HEAD
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...........................................................              [100%]

----------- coverage: platform linux, python 3.8.5-final-0 -----------
Coverage XML written to file coverage.xml

= 5002 passed, 69 skipped, 176 xfailed, 152 xpassed, 9467 warnings in 77.47s (0:01:17) =

* TEST-modin-project#1891: use conda instead of pip Signed-off-by: Anatoly Myachev <anatoly.myachev@intel.com> * TEST-modin-project#1891: remove source ctivate modin Signed-off-by: Anatoly Myachev <anatoly.myachev@intel.com> * TEST-modin-project#1891: pin some dev tools Signed-off-by: Anatoly Myachev <anatoly.myachev@intel.com>

TEST-modin-project#1891: use conda instead of pip

bf3902e

Signed-off-by: Anatoly Myachev <anatoly.myachev@intel.com>

anmyachev force-pushed the conda-in-teamcity branch from a287f7f to bf3902e Compare September 9, 2020 17:40

anmyachev added 2 commits September 9, 2020 21:20

TEST-modin-project#1891: remove source ctivate modin

74cc509

Signed-off-by: Anatoly Myachev <anatoly.myachev@intel.com>

TEST-modin-project#1891: pin some dev tools

cc3985e

Signed-off-by: Anatoly Myachev <anatoly.myachev@intel.com>

anmyachev requested a review from dchigarev September 9, 2020 20:32

dchigarev approved these changes Sep 9, 2020

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dchigarev merged commit 847d4a3 into modin-project:master Sep 9, 2020

anmyachev deleted the conda-in-teamcity branch November 2, 2020 00:09

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TEST-#1891: use conda instead of pip #2056

TEST-#1891: use conda instead of pip #2056

anmyachev commented Sep 9, 2020 •

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modin-bot commented Sep 9, 2020

TEST-#1891: use conda instead of pip #2056

TEST-#1891: use conda instead of pip #2056

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