From b044057e39346295b8c87a4d5582aea88989792e Mon Sep 17 00:00:00 2001 From: npklein Date: Tue, 16 Jun 2015 11:21:21 +0200 Subject: [PATCH] update gatk version in parameter file --- compute5/Public_RNA-seq_genotypeCalling/testParameters.csv | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/compute5/Public_RNA-seq_genotypeCalling/testParameters.csv b/compute5/Public_RNA-seq_genotypeCalling/testParameters.csv index 5a8f82fc..8964ba6e 100644 --- a/compute5/Public_RNA-seq_genotypeCalling/testParameters.csv +++ b/compute5/Public_RNA-seq_genotypeCalling/testParameters.csv @@ -27,7 +27,7 @@ cosmicVersion,v70 RVersion,3.1.2-goolf-1.7.20 anacondaVersion,1.8.0-Linux-x86_64 samtoolsVersion,0.1.19-goolf-1.7.20 -gatkVersion,3.3-0-Java-1.7.0_80 +gatkVersion,3.4-0-Java-1.7.0_80 picardVersion,1.102-Java-1.7.0_80 ensemblVersion,75 genomeBuild,b37