pyproject.toml

[tool.poetry]
name = "OntoRunNER"
version = "0.1.3"
description = "This is a wrapper project around various entity recognition (NER) tools."
authors = ["Harshad Hegde <hhegde@lbl.gov>"]
readme = "README.md"
license = "MIT"

[tool.poetry.dependencies]
python = "^3.8"
kgx = "^1.5.8"
click = "^8.1.3"
pandas = "^1.4.2"
textdistance = {extras = ["extras"], version = "^4.2.2"}
OGER = "^1.5"
six = "^1.16.0"
spacy = ">=3.2.0,<3.3.0"
scispacy = "0.5.0"
dframcy = "^0.1.6"
CairoSVG = "^2.5.2"

[tool.poetry.scripts]
ontospacy = "ontorunner.spacy_module:main"
ontoger = "ontorunner.oger_module:cli"
onto-util = "ontorunner.pre.util:cli"

[tool.poetry.dev-dependencies]
pytest = "^7.1.2"

[tool.poetry.dependencies.en_ner_craft_md]
url = "https://s3-us-west-2.amazonaws.com/ai2-s2-scispacy/releases/v0.5.0/en_ner_craft_md-0.5.0.tar.gz"

[tool.poetry.dependencies.en_core_web_sm]
url = "https://github.com/explosion/spacy-models/releases/download/en_core_web_sm-3.2.0/en_core_web_sm-3.2.0.tar.gz"

[tool.poetry.extras]
docs = ["sphinx", "sphinx_rtd_theme", "sphinx-autodoc-typehints", "sphinx-click", "recommonmark"]

[build-system]
requires = ["poetry-core>=1.0.0"]
build-backend = "poetry.core.masonry.api"