Releases: moshi4/pyGenomeViz
Releases · moshi4/pyGenomeViz
v1.4.2
Fixed
- Fixed track segment separator position adjustment bug (#68)
- Fixed to remove completely overlap alignment links
v1.4.1
Change Log
Fixed
- Set encoding="utf-8" explicitly to avoid Windows default encoding issue (#63)
- Fixed incorrect gz compressed file extension check logic (#64)
v1.4.0
Change Log
Added
- Added extra_tooltip argument to
add_feature()
method explicitly (#61)
- Added
get_seqid2record()
method to Fasta parser class
Changed
- Dropped python3.8 support
Fixed
- Fixed to skip mmseqs search for no cds genome (#58)
- Fixed
get_seqid2seq()
method incorrect return type
v1.3.0
Change Log
New Functionality
- Added theme option (
light
[default] or dark
)
- Added Fasta parser class
- Added
load_example_fasta_dataset()
utility function
- Added
to_stack_features()
helper function to avoid feature overlap
Bug Fix
- Fixed to ignore features that have no location (#54)
v1.2.1
Change Log
Bug Fix
- Fixed a bug that the dependent libraries for HTML viewer were not packaged correctly
v1.2.0
Change Log
New Functionality
- Added Features Table to HTML viewer experimentally (Demo Page)
- Added unit argument to
gv.set_scale_xticks()
to enable choose Gb, Mb, Kb, bp unit
- Added target_strand & target_range argument to
gff.extract_exon_features()
Improvement
- Improved HTML viewer code & UI design
- Fixed to raise error in
gv.savefig_html()
for invalid figure
- Switched package manager
poetry
to rye
v1.1.0
Change Log
Improvement
- Added reverse complement option to GUI
Bug Fix
- Fixed unexpected
sys.exit
when calling aligner tool
v0.4.4
Change Log
Improvement
- Added
track.add_features()
method
Bug Fix
- Fixed a bug that caused an error in the GUI when uploaded files contain parentheses
()
.
v0.4.3
Change Log
Bug Fix
- Fixed bug due to matplotlib v3.8.0 changes (#22)
- Fixed
savefig()
to suppress memory leak during multiple plots