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Achievement: Arctic Code Vault ContributorAchievement: Pull Shark

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Achievement: Arctic Code Vault ContributorAchievement: Pull Shark

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  1. BlastoutAnalyze BlastoutAnalyze Public

    It's a modulino used to analyze BLAST output and a database for BLAST.

    Perl 1

  2. FindOrigin FindOrigin Public

    Perl modulino used to analyze BLAST output and BLAST database in ClickHouse (columnar DBMS for OLAP and analytics).

    2 1

  3. PsiBlastHelper PsiBlastHelper Public

    PsiBlastHelper - It's modulino that splits fasta input file into number of chunks for BLAST, PSI-BLAST and HMMER. It also writes SGE and HTCondor scripts to run these jobs on cluster or grid.

    Perl 2

  4. calculate_hypergeometric_test calculate_hypergeometric_test Public

    R script that will calculate log-odds, hypergeometric test, FDR and Bonferroni correction

    R

  5. CompareMaps CompareMaps Public

    CompareMaps - It's an R script to compare two phylostratigraphic maps and visualize this comparison using heatmap.

    R 1 1

  6. MySQLinstall MySQLinstall Public

    MySQLinstall - is Perl installation script (modulino) that installs MySQL (or Percona MySQL or MariaDB) in a sandbox using MySQL::Sandbox, additional engines like TokuDB and Deep and updates config…

    Perl