NAMESPACE

# Generated by roxygen2: do not edit by hand

S3method("[",Chromunity)
S3method("[",Covariate)
S3method(c,Chromunity)
S3method(c,Covariate)
S3method(length,Chromunity)
S3method(length,Covariate)
S3method(names,Chromunity)
S3method(names,Covariate)
export(Chromunity)
export(ChromunityObj)
export(Covariate)
export(annotate)
export(cmessage)
export(covariate)
export(csv2gr)
export(fit)
export(parquet2gr)
export(powerset)
export(re_background)
export(re_chromunity)
export(sliding_window_background)
export(sliding_window_chromunity)
export(smessage)
export(sscore)
export(synergy)
import(GenomicRanges)
import(R6)
import(arrow)
import(gUtils)
import(zoo)
importFrom(BiocGenerics,t)
importFrom(MASS,ginv)
importFrom(Matrix,sparseMatrix)
importFrom(data.table,data.table)
importFrom(data.table,rbindlist)
importFrom(data.table,set)
importFrom(data.table,setDT)
importFrom(data.table,setkey)
importFrom(data.table,setkeyv)
importFrom(data.table,setnames)
importFrom(data.table,transpose)
importFrom(igraph,cluster_fast_greedy)
importFrom(igraph,cluster_louvain)
importFrom(igraph,graph.adjacency)
importFrom(magrittr,"%>%")
importFrom(parallel,mclapply)
importFrom(pbmcapply,pbmclapply)
importFrom(plyr,round_any)
importFrom(stats,median)
importFrom(stats,na.omit)
importFrom(utils,globalVariables)