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dorado demux new output names #1026

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phpeters opened this issue Sep 18, 2024 · 3 comments
Closed

dorado demux new output names #1026

phpeters opened this issue Sep 18, 2024 · 3 comments
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documentation Improvements or additions to documentation

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@phpeters
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Thanks guys for the new version!

Not really an issue, more something for the changelog: The naming of the demux-output files contains now the acquisition ID as well and not only the provided alias from the sample sheet.

dorado demux --output-dir demux --sample-sheet sampleSheet.csv sample.bam
new output with v0.8.0: acquisitionID_alias.bam
old output until v0.7.3: alias.bam

all the best!
Philipp

@HalfPhoton HalfPhoton added the documentation Improvements or additions to documentation label Sep 18, 2024
@HalfPhoton
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Thanks @phpeters for bringing this to our attention.

Appended the following to the release note:

db73e5d - Add run_id to filenames output by demux

Best regards,
Rich

@jfnjdoh
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jfnjdoh commented Sep 26, 2024

This broke a nextflow pipeline I had but it's an easy fix. I'm just curious, what was the reason for this change?

@HalfPhoton
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@jfnjdoh - This allows inputs from multiple different runs but of the same barcode kit to be easily identifiable after being demuxed together.

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