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Consider using collectFile to optimise aggregating of results of bin statistics steps #532

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jfy133 opened this issue Nov 3, 2023 · 0 comments
Open

Consider using collectFile to optimise aggregating of results of bin statistics steps #532

jfy133 opened this issue Nov 3, 2023 · 0 comments
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enhancement New feature or request

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jfy133 commented Nov 3, 2023

Description of feature

As described by @maxibor here: #489 (comment)

Where originally we were getting file name clashes of bins sent to (microbes) and skipped (eukaryotes) around DASTool. This was fixed by Maxime by adding correct prefixes with all the information, but it may make sense to use collectFile to merge the contents which would avoid such clashes. However there were some things to explore as described in the PR above.
@jfy133 jfy133 added the enhancement New feature or request label Nov 3, 2023
@maxibor maxibor mentioned this issue Dec 5, 2023
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