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Add to VCF report #365

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17 tasks done
rannick opened this issue May 16, 2023 · 0 comments · Fixed by #414
Closed
17 tasks done

Add to VCF report #365

rannick opened this issue May 16, 2023 · 0 comments · Fixed by #414
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rannick commented May 16, 2023 •
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Description of feature

  • Gene fusion
  • Found in DB
  • arriba
  • fusioncatcher
  • starfusion
  • Tools hits
  • score
  • junction reads
  • spanning fragments
  • ffpm
  • breakpoints coordinates
  • Frame status (PROT_FUSION_TYPE)
  • transcript IDs
  • transcript version
  • HGNC id
  • transcript annotations (annots from fusioninspector?)
  • exon number
@rannick rannick self-assigned this Sep 1, 2023
@rannick rannick added this to the 3.0.0 milestone Sep 6, 2023
@rannick rannick mentioned this issue Oct 30, 2023
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@rannick rannick closed this as completed Nov 20, 2023
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from megafusion to vcf_collect nf-core/rnafusion
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