From 07942021d89c3000dae0b53a9ff6416a3090dcf2 Mon Sep 17 00:00:00 2001
From: ggabernet <gisela.gabernet@qbic.uni-tuebingen.de>
Date: Mon, 24 Feb 2020 23:11:46 +0100
Subject: [PATCH] skip gc correction

---
 bin/run_ascat.r | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/bin/run_ascat.r b/bin/run_ascat.r
index d8800f91b..5d531592b 100755
--- a/bin/run_ascat.r
+++ b/bin/run_ascat.r
@@ -52,7 +52,7 @@ if(opt$gender=="XY"){
 
 
 #GC wave correction
-ascat.bc = ascat.GCcorrect(ascat.bc, opt$gcfile)
+#ascat.bc = ascat.GCcorrect(ascat.bc, opt$gcfile)
 
 #Plot the raw data
 ascat.plotRawData(ascat.bc)