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AGeNT #1630

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RP-Bioinfo opened this issue Aug 26, 2024 · 0 comments
Open

AGeNT #1630

RP-Bioinfo opened this issue Aug 26, 2024 · 0 comments
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enhancement New feature or request

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@RP-Bioinfo
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Description of feature

Hi guys!

I'm a researcher dealing with the secondary analysis of targeted and whole-exome data. Since we use the Agilent SureSelect XT HS2 kits, which adds to sequencing libraries​ the duplex molecular barcodes, we need AGeNT tool (Agilent) for trimming and deduplication of reads. Is there any way to incorporate this tool into sarek? Thanks in advance for your reply.

Best wishes.

Riccardo
@RP-Bioinfo RP-Bioinfo added the enhancement New feature or request label Aug 26, 2024
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