diff --git a/main.nf b/main.nf index 280153f35e..2b2c828a1d 100644 --- a/main.nf +++ b/main.nf @@ -1571,7 +1571,7 @@ process BaseRecalibrator { BaseRecalibrator \ -I ${bam} \ -O ${prefix}${idSample}.recal.table \ - --tmp-dir /tmp \ + --tmp-dir . \ -R ${fasta} \ ${intervalsOptions} \ ${dbsnpOptions} \