diff --git a/workflows/smrnaseq.nf b/workflows/smrnaseq.nf index d563ce55..43f08bff 100644 --- a/workflows/smrnaseq.nf +++ b/workflows/smrnaseq.nf @@ -148,6 +148,7 @@ workflow NFCORE_SMRNASEQ { FASTP_LENGTH_FILTER ( UMITOOLS_EXTRACT.out.reads, mirna_adapters, + false, params.save_trimmed_fail, params.save_merged )