From 9b103316a0b444c127b8c090a2f9a7a50c9a04f9 Mon Sep 17 00:00:00 2001 From: Adrien Coulier Date: Fri, 15 Dec 2023 08:44:10 +0100 Subject: [PATCH] Bump version to 1.5.0dev --- assets/multiqc_config.yml | 4 ++-- nextflow.config | 2 +- tests/pipeline/bases2fastq.nf.test.snap | 2 +- tests/pipeline/bcl2fastq.nf.test.snap | 2 +- tests/pipeline/bclconvert.nf.test.snap | 2 +- tests/pipeline/fqtk.nf.test.snap | 2 +- tests/pipeline/sgdemux.nf.test.snap | 2 +- tests/pipeline/skip_tools.nf.test.snap | 10 +++++----- 8 files changed, 13 insertions(+), 13 deletions(-) diff --git a/assets/multiqc_config.yml b/assets/multiqc_config.yml index 2ec4cab7..6977daec 100644 --- a/assets/multiqc_config.yml +++ b/assets/multiqc_config.yml @@ -1,7 +1,7 @@ report_comment: > - This report has been generated by the nf-core/demultiplex + This report has been generated by the nf-core/demultiplex analysis pipeline. For information about how to interpret these results, please see the - documentation. + documentation. report_section_order: "nf-core-demultiplex-methods-description": order: -1000 diff --git a/nextflow.config b/nextflow.config index ceaf4ea6..23bfaaad 100755 --- a/nextflow.config +++ b/nextflow.config @@ -240,7 +240,7 @@ manifest { description = """Demultiplexing pipeline for Illumina sequencing data""" mainScript = 'main.nf' nextflowVersion = '!>=23.04.0' - version = '1.4.0' + version = '1.5.0dev' doi = '10.5281/zenodo.7153103' } diff --git a/tests/pipeline/bases2fastq.nf.test.snap b/tests/pipeline/bases2fastq.nf.test.snap index 2fc953bf..af259569 100644 --- a/tests/pipeline/bases2fastq.nf.test.snap +++ b/tests/pipeline/bases2fastq.nf.test.snap @@ -1,7 +1,7 @@ { "software_versions": { "content": [ - "{BASES2FASTQ={bases2fastq=1.1.0.593880262, use subject to license available at elementbiosciences.com}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.12.0, yaml=6.0.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, UNTAR={untar=1.30}, Workflow={nf-core/demultiplex=1.4.0}}" + "{BASES2FASTQ={bases2fastq=1.1.0.593880262, use subject to license available at elementbiosciences.com}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.12.0, yaml=6.0.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, UNTAR={untar=1.30}, Workflow={nf-core/demultiplex=1.5.0dev}}" ], "timestamp": "2023-12-11T16:57:34.674489" }, diff --git a/tests/pipeline/bcl2fastq.nf.test.snap b/tests/pipeline/bcl2fastq.nf.test.snap index 2e540a84..5bd85eb5 100644 --- a/tests/pipeline/bcl2fastq.nf.test.snap +++ b/tests/pipeline/bcl2fastq.nf.test.snap @@ -1,7 +1,7 @@ { "software_versions": { "content": [ - "{BCL2FASTQ={bcl2fastq=2.20.0.422}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.12.0, yaml=6.0.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.4.0}}" + "{BCL2FASTQ={bcl2fastq=2.20.0.422}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.12.0, yaml=6.0.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.5.0dev}}" ], "timestamp": "2023-12-11T16:55:21.645426" }, diff --git a/tests/pipeline/bclconvert.nf.test.snap b/tests/pipeline/bclconvert.nf.test.snap index b9f9f952..5e5d0ea5 100644 --- a/tests/pipeline/bclconvert.nf.test.snap +++ b/tests/pipeline/bclconvert.nf.test.snap @@ -24,7 +24,7 @@ }, "software_versions": { "content": [ - "{BCLCONVERT={bclconvert=00.000.000.4.2.4}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.12.0, yaml=6.0.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.4.0}}" + "{BCLCONVERT={bclconvert=00.000.000.4.2.4}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.12.0, yaml=6.0.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.5.0dev}}" ], "timestamp": "2023-12-11T16:56:35.649441" }, diff --git a/tests/pipeline/fqtk.nf.test.snap b/tests/pipeline/fqtk.nf.test.snap index 3de14c5a..4c7c41be 100644 --- a/tests/pipeline/fqtk.nf.test.snap +++ b/tests/pipeline/fqtk.nf.test.snap @@ -7,7 +7,7 @@ }, "software_versions": { "content": [ - "{CUSTOM_DUMPSOFTWAREVERSIONS={python=3.12.0, yaml=6.0.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, FQTK={fqtk=0.2.1}, UNTAR={untar=1.30}, Workflow={nf-core/demultiplex=1.4.0}}" + "{CUSTOM_DUMPSOFTWAREVERSIONS={python=3.12.0, yaml=6.0.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, FQTK={fqtk=0.2.1}, UNTAR={untar=1.30}, Workflow={nf-core/demultiplex=1.5.0dev}}" ], "timestamp": "2023-12-11T17:05:36.315291" } diff --git a/tests/pipeline/sgdemux.nf.test.snap b/tests/pipeline/sgdemux.nf.test.snap index 8ca7d4de..ebbe2e13 100644 --- a/tests/pipeline/sgdemux.nf.test.snap +++ b/tests/pipeline/sgdemux.nf.test.snap @@ -1,7 +1,7 @@ { "software_versions": { "content": [ - "{CUSTOM_DUMPSOFTWAREVERSIONS={python=3.12.0, yaml=6.0.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, SGDEMUX={sgdemux=1.1.1}, UNTAR={untar=1.30}, Workflow={nf-core/demultiplex=1.4.0}}" + "{CUSTOM_DUMPSOFTWAREVERSIONS={python=3.12.0, yaml=6.0.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, SGDEMUX={sgdemux=1.1.1}, UNTAR={untar=1.30}, Workflow={nf-core/demultiplex=1.5.0dev}}" ], "timestamp": "2023-12-11T16:59:13.85618" }, diff --git a/tests/pipeline/skip_tools.nf.test.snap b/tests/pipeline/skip_tools.nf.test.snap index d9bea04c..dbbb52d8 100644 --- a/tests/pipeline/skip_tools.nf.test.snap +++ b/tests/pipeline/skip_tools.nf.test.snap @@ -1,7 +1,7 @@ { "software_versions_skip_trimming": { "content": [ - "{BCLCONVERT={bclconvert=00.000.000.4.2.4}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.12.0, yaml=6.0.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.4.0}}" + "{BCLCONVERT={bclconvert=00.000.000.4.2.4}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.12.0, yaml=6.0.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.5.0dev}}" ], "timestamp": "2023-12-11T17:00:30.102965" }, @@ -95,25 +95,25 @@ }, "software_versions_skip_fastqc": { "content": [ - "{BCLCONVERT={bclconvert=00.000.000.4.2.4}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.12.0, yaml=6.0.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.4.0}}" + "{BCLCONVERT={bclconvert=00.000.000.4.2.4}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.12.0, yaml=6.0.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.5.0dev}}" ], "timestamp": "2023-12-11T17:02:16.631766" }, "software_versions_skip_fastp_fastqc": { "content": [ - "{BCLCONVERT={bclconvert=00.000.000.4.2.4}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.12.0, yaml=6.0.1}, FALCO={falco=1.2.1}, Workflow={nf-core/demultiplex=1.4.0}}" + "{BCLCONVERT={bclconvert=00.000.000.4.2.4}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.12.0, yaml=6.0.1}, FALCO={falco=1.2.1}, Workflow={nf-core/demultiplex=1.5.0dev}}" ], "timestamp": "2023-12-11T17:02:44.134341" }, "software_versions_skip_multiqc": { "content": [ - "{BCLCONVERT={bclconvert=00.000.000.4.2.4}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.12.0, yaml=6.0.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.4.0}}" + "{BCLCONVERT={bclconvert=00.000.000.4.2.4}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.12.0, yaml=6.0.1}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.5.0dev}}" ], "timestamp": "2023-12-11T17:03:50.096961" }, "software_versions_skip_fastp": { "content": [ - "{BCLCONVERT={bclconvert=00.000.000.4.2.4}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.12.0, yaml=6.0.1}, FALCO={falco=1.2.1}, Workflow={nf-core/demultiplex=1.4.0}}" + "{BCLCONVERT={bclconvert=00.000.000.4.2.4}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.12.0, yaml=6.0.1}, FALCO={falco=1.2.1}, Workflow={nf-core/demultiplex=1.5.0dev}}" ], "timestamp": "2023-12-11T17:00:57.483981" },