Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Ensure qform/sform copy doesn't modify zooms (or warn if it does) #2284

Open
effigies opened this issue Sep 24, 2020 · 1 comment
Open

Ensure qform/sform copy doesn't modify zooms (or warn if it does) #2284

effigies opened this issue Sep 24, 2020 · 1 comment
Labels
bug qform/sform issue
Milestone
20.2.0 LTS

Comments

@effigies
Copy link
Member

What version of fMRIPrep are you using?

20.2.0rc0

What kind of installation are you using? Containers (Singularity, Docker), or "bare-metal"?

TACC Run

ds000229 - sub-07

Did fMRIPrep generate the visual report for this particular subject? If yes, could you share it?

Screen Shot 2020-09-24 at 09 09 18

Details

BOLD looks significantly larger than T1w, and sform was copied to qform. This has the potential to change pixdim, since qform is built from quaternions, offsets and pixdim.

This is a note to verify, but probably shouldn't block.
@effigies effigies added the bug label Sep 24, 2020
@effigies effigies added this to the 20.2.0 LTS milestone Sep 24, 2020
@oesteban
Copy link
Member

This particular instance could be a visual effect of #2282.

@oesteban oesteban mentioned this issue Oct 24, 2020
Closed
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
bug qform/sform issue
Projects
None yet
Milestone
20.2.0 LTS
Development

No branches or pull requests
2 participants
@effigies @oesteban