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Clean up testing suite #2759

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mgxd opened this issue Apr 11, 2022 · 0 comments · Fixed by #2764
Closed

Clean up testing suite #2759

mgxd opened this issue Apr 11, 2022 · 0 comments · Fixed by #2764
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@mgxd
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mgxd commented Apr 11, 2022

Currently our tests cover a few potential pathways:

  • ds005 (2 BOLD runs) [~180m]

    • legacy run (legacymultiproc, legacy output layout) [~90m]
      • output spaces: fsnative, fsaverage5
    • rerun with --output-layout bids [~15m]
      • output spaces: fsaverage5
    • third rerun (single task) [~75m]
      • output spaces: MNI152NLin2009cAsym fsaverage5 fsnative MNI152NLin6Asym anat
      • ica aroma
      • cifti output

  • ds210 (1 BOLD run, 3 echoes) [~90m]

    • run fmriprep
      • use-syn-sdc

  • ds054 (fmap, 2 BOLD runs) [~50m]

    • run fmriprep
      • output spaces: MNI152NLin2009cAsym:res-2 anat func

ds005 is too close to the job limit (~3h), we probably should port over the legacy tests to ds054 (or drop them all together).
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CI: Touch up CircleCI configuration nipreps/fmriprep
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