From 93791a285987cdf1d87705ff4839246d61a53798 Mon Sep 17 00:00:00 2001
From: oesteban <code@oscaresteban.es>
Date: Wed, 15 Mar 2017 08:23:13 -0700
Subject: [PATCH] update work directory in tests

---
 circle.yml             | 2 +-
 docker/files/run_tests | 4 +---
 2 files changed, 2 insertions(+), 4 deletions(-)

diff --git a/circle.yml b/circle.yml
index 198c73297..08a2f4aab 100644
--- a/circle.yml
+++ b/circle.yml
@@ -25,7 +25,7 @@ dependencies:
 test:
   override:
     # Test mriqcp
-    - docker run -i -v /etc/localtime:/etc/localtime:ro -v ${CIRCLE_TEST_REPORTS}:/scratch -w /root/src/mriqc --entrypoint="/usr/bin/run_tests" mriqc:py35 :
+    - docker run -i -v /etc/localtime:/etc/localtime:ro -v ${CIRCLE_TEST_REPORTS}:/scratch -w /opt/src/mriqc --entrypoint="/usr/bin/run_tests" mriqc:py35 :
         timeout: 2600
     - docker run -i -v /etc/localtime:/etc/localtime:ro -v ~/data:/data:ro -v $SCRATCH:/scratch -w /scratch mriqc:py35 /data/${TEST_DATA_NAME} out/ participant --testing --verbose-reports :
         timeout: 3200
diff --git a/docker/files/run_tests b/docker/files/run_tests
index f41b619a3..adcd7c2d4 100644
--- a/docker/files/run_tests
+++ b/docker/files/run_tests
@@ -1,4 +1,2 @@
 #!/bin/bash
-source /etc/fsl/fsl.sh
-source /etc/afni/afni.sh
-py.test --ignore=src/ -n 16 --junitxml=/scratch/tests.xml
+py.test --ignore=src/ -n ${CIRCLE_NCPUS:-4} --junitxml=/scratch/tests.xml