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nipreps · Jul 11, 2023 · 7fd9a69 · 7fd9a69
1 parent 507d170
commit 7fd9a69
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/sdcflows/workflows/fit/pepolar.py b/sdcflows/workflows/fit/pepolar.py
@@ -149,7 +149,7 @@ def init_topup_wf(
     to_las = pe.Node(ReorientImageAndMetadata(target_orientation="LAS"), name="to_las")
     topup = pe.Node(
         TOPUP(
-            config=data.load(f"flirtsch/b02b0{'_quick' * sloppy}.cnf")
+            config=str(data.load(f"flirtsch/b02b0{'_quick' * sloppy}.cnf"))
         ),
         name="topup",
     )

diff --git a/sdcflows/workflows/fit/syn.py b/sdcflows/workflows/fit/syn.py
@@ -451,7 +451,7 @@ def init_syn_preprocessing_wf(
     prior2epi = pe.Node(
         ApplyTransforms(
             invert_transform_flags=[True, False, False],
-            input_image=data.load("fmap_atlas.nii.gz"),
+            input_image=str(data.load("fmap_atlas.nii.gz")),
         ),
         name="prior2epi",
         n_procs=omp_nthreads,