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fixed critical bug
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group and reaction parse
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noriakis committed Feb 4, 2024
1 parent f32c1ba commit a10f611
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2 changes: 1 addition & 1 deletion DESCRIPTION
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@@ -1,7 +1,7 @@
Package: ggkegg
Type: Package
Title: KEGG pathway visualization by ggplot2
Version: 1.1.13
Version: 1.1.14
Authors@R: person("Noriaki", "Sato", email = "nori@hgc.jp", role = c("cre", "aut"))
Description: This package aims to import, parse, and analyze KEGG data such as KEGG PATHWAY and KEGG MODULE. The package supports visualizing KEGG information using ggplot2 and ggraph through using the grammar of graphics. The package enables the direct visualization of the results from various omics analysis packages.
License: MIT + file LICENSE
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1 change: 1 addition & 0 deletions R/pathway_functions.R
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Expand Up @@ -215,6 +215,7 @@ pathway <- function(pid,
"subtype_name","subtype_value"))
if ("reaction" %in% colnames(kegg_edges)) {
gr_rels$reaction <- "in_group"
gr_rels$reaction_id <- "in_group"
}
kegg_edges <- rbind(kegg_edges, gr_rels)
}
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