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New projects, packages, ideas for follow ups, new revisions, etc. #92
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Rule 11 by Kovačević
Via https://twitter.com/kovmil/status/1326334135896518661 @kovmil I'll think about this a little bit more, but my spontaneous reaction is: it would have been great you'd seen the preprint! |
Will most definitely do! And yeah, copying the Dockerfile to the image's root folder can do wonders with Dockerfile code reuse. |
Screenshot from https://journals.plos.org/ploscompbiol/article/comment?id=10.1371/annotation/d538b698-fbf5-4318-8e45-c421d2495b8c
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There are some interesting ideas here! I noticed that there are some highlights/comments on the OSF preprint too. It might be worth keeping an eye on that for more useful suggestions. |
Good to see our friend Yaroslav contributing some great points!
…On Wed, Nov 25 2020, Daniel Nüst wrote:
Screenshot from https://journals.plos.org/ploscompbiol/article/comment?id=10.1371/annotation/d538b698-fbf5-4318-8e45-c421d2495b8c
![image](https://user-images.githubusercontent.com/1325054/100255312-a60b3a00-2f43-11eb-9d8e-6e5ae0ec4f5d.png)
- Mentions option to freeze whole APT repositories to a specific date, e.g. http://neuro.debian.net/pkgs/neurodebian-freeze.html - I think this is indeed a god option
- Mentions https://github.com/ReproNim/neurodocker/ as a tool, though I would have the concern here that `neurodocker` is a CLI tool to generate a `Dockerfile`, which might not be accessible to many users, but it allows to enforce good practices within the generated `Dockerfile`
- Mentions https://github.com/datalad/datalad-container/ and `git-annex` - would have to look more closely, first reaction would be that `git-annex` goes to far for the target audience, but is could be a nice way to snapshot/version control the actual exported image
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All hail @yarikoptic! |
Great to see my humble comments to the great paper are taken into consideration ;) we also have WiP script to help to backup all docker images for a repository into git-annex (well -- datalad-container extension) for posterity/backup/re-sharing/whatever |
The paper is "finished", but if we really follow up with a CRAN Task View Containerisation, then we can keep the collection of container-related works up to date. Let's collect "new" packages and projects or things we missed in the article here, until we know where to publish them.
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