source_build.yml

name: "Source Build"
on:
  push:
  pull_request:
  schedule:
    - cron: '0 0 * * *'

jobs:
  build:
    strategy:
      matrix:
        build_bf: [false]
        build_zarr: [false, true]
        build_snapshot: [false]
    name: Build OMERO from source
    runs-on: ubuntu-20.04
    env:
      ICE_HOME: /opt/ice-3.6.5
    steps:
      - uses: actions/checkout@v3
      - name: Install Ice and Ice python binding
        if: matrix.build_snapshot
        uses: ome/action-ice@v2.1
      - name: Set up JDK 11
        if: matrix.build_snapshot
        uses: actions/setup-java@v3
        with:
            java-version: 11
            distribution: 'zulu'
      - name: Set up Gradle 6.8.3
        if: matrix.build_snapshot
        uses: gradle/gradle-build-action@v2
        with:
          gradle-version: 6.8.3
          arguments: build -x test
          build-root-directory: components/tools/OmeroJava # required by the action to have a *.gradle file"
      - name: Install and run flake8
        run: |
          pip install flake8
          flake8 .
      - name: install dependencies
        run: |
          sudo apt-get install -y git
      - name: Build Bio-Formats
        id: bf
        if: matrix.build_bf
        run: |
          git clone https://github.com/ome/bioformats /tmp/bioformats --depth 1
          cd /tmp/bioformats
          mvn install -DskipTests -q
          echo "bf_version=$(mvn help:evaluate -Dexpression=project.version -q -DforceStdout)" >> $GITHUB_OUTPUT
          echo "ome_common_version=$(mvn help:evaluate -Dexpression=ome-common.version -q -DforceStdout)" >> $GITHUB_OUTPUT
      - name: Build ZarrReader
        id: zarr_reader
        if: matrix.build_zarr
        run: |
          git clone https://github.com/ome/ZarrReader /tmp/ZarrReader --depth 1
          cd /tmp/ZarrReader
          mvn install -DskipTests -q
          echo "zarr_reader_version=$(mvn help:evaluate -Dexpression=project.version -q -DforceStdout)" >> $GITHUB_OUTPUT
      - name: Set ZarrReader version
        if: matrix.build_zarr
        run: |
          sed -i 's/versions.OMEZarrReader=.*/versions.OMEZarrReader=${{ steps.zarr_reader.outputs.zarr_reader_version }}/' etc/omero.properties
      - name: Set Bio-Formats version
        if: matrix.build_bf
        run: |
          DEPENDENCY="<dependency org=\"org.openmicroscopy\" name=\"ome-common\" rev=\"${{ steps.bf.outputs.ome_common_version }}\">\n<artifact name=\"ome-common\" type=\"jar\" ext=\"jar\"\/>\n<\/dependency>"
          sed -i 's/versions.bioformats=.*/versions.bioformats=${{ steps.bf.outputs.bf_version }}/' etc/omero.properties
          sed -i "s/<dependencies>/<dependencies>\n $DEPENDENCY/" components/tools/OmeroJava/ivy.xml
      - name: Build snapshot
        if: matrix.build_snapshot
        id: snapshot
        run: |
          # to use own repo
          # git clone -b your_branch https://github.com/your_repo/omero-gateway-java /tmp/omero-gateway-java
          git clone https://github.com/ome/omero-gateway-java /tmp/omero-gateway-java --depth 1
          cd /tmp/omero-gateway-java
          gradle publishToMavenLocal -x test
          echo "gateway_version=$(gradle properties -q | grep "version:" | awk '{print $2}')" >> $GITHUB_OUTPUT
      - name: Set snapshot version
        if: matrix.build_snapshot
        run: |
          sed -i 's/versions.omero-gateway=.*/versions.omero-gateway=${{ steps.snapshot.outputs.gateway_version }}/' etc/omero.properties
      - name: Build
        run: ./build.py
      - name: Rebuild
        run: ./build.py clean && ./build.py