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DESCRIPTION
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Package: DeconvExplorer
Type: Package
Title: DeconvExplorer for omnideconv
Version: 0.1.0
Authors@R:
c(
person(
given = "Constantin", family = "Zackl", role = c("aut", "cre"),
email = "zacklcon@uni-mainz.de", comment = c(ORCID = "0000-0003-1991-6943")
),
person(
given = "Alexander", family = "Dietrich", role = c("aut"),
email = "alex.dietrich@tum.de", comment = c(ORCID = "0000-0002-8661-0453")
),
person(
given = "Lorenzo", family = "Merotto", role = c("aut"),
email = "lorenzo.merotto@uibk.ac.at", comment = c(ORCID = "0009-0006-0637-8436")
),
person(
given = "Federico", family = "Marini", role = c("aut"),
email = "marinif@uni-mainz.de", comment = c(ORCID = "0000-0003-3252-7758")
)
)
Description: Shiny Frontend for the omnideconv R Package. This interactive application
enables running a variety of deconvolution methods, with a simple and intuitive
graphical user interface. It also provides functionality to visualize and refine
the signatures generated by the newer iteration of deconvolution methods.
License: MIT + file LICENSE
Depends:
R (>= 4.1.0)
Imports:
shiny,
shinydashboard,
shinyBS,
omnideconv,
plotly,
ggplot2,
ggpubr,
corrplot,
ggforce,
SummarizedExperiment,
shinycssloaders,
waiter,
rintrojs,
DT,
shinyjs,
stringr,
tidyr,
rlang,
utils,
tools,
vroom,
ComplexHeatmap,
grid,
InteractiveComplexHeatmap,
RColorBrewer,
grDevices,
stats,
circlize,
BioQC,
shinyWidgets
RoxygenNote: 7.3.1
Encoding: UTF-8
Remotes:
github::omnideconv/omnideconv
Suggests:
knitr,
rmarkdown,
bookdown,
testthat (>= 3.0.0),
markdown
biocViews:
Software, GeneExpression, ImmunoOncology, Sequencing, Transcription,
Classification, Transcriptomics, Visualization
URL: https://github.com/omnideconv/DeconvExplorer/
BugReports: https://github.com/omnideconv/DeconvExplorer/issues
VignetteBuilder: knitr
Config/testthat/edition: 3