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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(DeconvExplorer)
export(download_signatureUpset)
export(errorModal)
export(plot_benchmark_correlation)
export(plot_benchmark_rmse)
export(plot_benchmark_scatter)
export(plot_conditionNumberPerMethod)
export(plot_meanEntropyPerMethod)
export(plot_signatureClustered)
export(plot_signatureGenesPerMethod)
export(plot_signatureUpset)
export(removePercentZeros)
export(removeUnspecificGenes)
export(renameCellType)
export(returnSelectedDeconvolutions)
export(selectGenesByScore)
import(omnideconv)
import(shiny, except = c(renderDataTable, dataTableOutput))
importFrom(BioQC,entropySpecificity)
importFrom(BioQC,gini)
importFrom(ComplexHeatmap,Heatmap)
importFrom(ComplexHeatmap,UpSet)
importFrom(ComplexHeatmap,comb_size)
importFrom(ComplexHeatmap,extract_comb)
importFrom(ComplexHeatmap,make_comb_mat)
importFrom(ComplexHeatmap,upset_top_annotation)
importFrom(DT,dataTableOutput)
importFrom(DT,datatable)
importFrom(DT,formatPercentage)
importFrom(DT,formatRound)
importFrom(DT,renderDataTable)
importFrom(InteractiveComplexHeatmap,InteractiveComplexHeatmapOutput)
importFrom(InteractiveComplexHeatmap,makeInteractiveComplexHeatmap)
importFrom(RColorBrewer,brewer.pal)
importFrom(SummarizedExperiment,assays)
importFrom(circlize,colorRamp2)
importFrom(corrplot,corrplot)
importFrom(ggforce,facet_grid_paginate)
importFrom(ggplot2,aes)
importFrom(ggplot2,aes_)
importFrom(ggplot2,aes_string)
importFrom(ggplot2,coord_cartesian)
importFrom(ggplot2,coord_flip)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,element_rect)
importFrom(ggplot2,element_text)
importFrom(ggplot2,facet_wrap)
importFrom(ggplot2,geom_abline)
importFrom(ggplot2,geom_boxplot)
importFrom(ggplot2,geom_col)
importFrom(ggplot2,geom_hline)
importFrom(ggplot2,geom_jitter)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_rect)
importFrom(ggplot2,geom_text)
importFrom(ggplot2,geom_tile)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,ggsave)
importFrom(ggplot2,guide_colorbar)
importFrom(ggplot2,guides)
importFrom(ggplot2,labs)
importFrom(ggplot2,scale_colour_brewer)
importFrom(ggplot2,scale_fill_brewer)
importFrom(ggplot2,scale_fill_gradient)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_minimal)
importFrom(ggplot2,ylim)
importFrom(ggpubr,stat_cor)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,dev.off)
importFrom(grDevices,pdf)
importFrom(grid,gpar)
importFrom(grid,unit)
importFrom(plotly,config)
importFrom(plotly,ggplotly)
importFrom(plotly,layout)
importFrom(plotly,plot_ly)
importFrom(plotly,plotlyOutput)
importFrom(plotly,renderPlotly)
importFrom(rintrojs,introBox)
importFrom(rintrojs,introjs)
importFrom(rintrojs,introjsUI)
importFrom(rintrojs,readCallback)
importFrom(rlang,.data)
importFrom(shiny,addResourcePath)
importFrom(shinyWidgets,actionBttn)
importFrom(shinyBS,bsPopover)
importFrom(shinycssloaders,withSpinner)
importFrom(shinydashboard,box)
importFrom(shinydashboard,dashboardBody)
importFrom(shinydashboard,dashboardHeader)
importFrom(shinydashboard,dashboardPage)
importFrom(shinydashboard,dashboardSidebar)
importFrom(shinydashboard,dropdownMenu)
importFrom(shinydashboard,menuItem)
importFrom(shinydashboard,notificationItem)
importFrom(shinydashboard,renderValueBox)
importFrom(shinydashboard,sidebarMenu)
importFrom(shinydashboard,tabItem)
importFrom(shinydashboard,tabItems)
importFrom(shinydashboard,valueBox)
importFrom(shinydashboard,valueBoxOutput)
importFrom(shinyjs,hide)
importFrom(shinyjs,show)
importFrom(shinyjs,useShinyjs)
importFrom(stats,complete.cases)
importFrom(stats,cor.test)
importFrom(stats,dist)
importFrom(stats,hclust)
importFrom(stats,sd)
importFrom(stringr,str_split)
importFrom(stringr,str_to_title)
importFrom(tidyr,pivot_longer)
importFrom(utils,read.delim)
importFrom(utils,write.csv)
importFrom(utils,write.table)
importFrom(waiter,Waitress)
importFrom(waiter,waiter_hide)
importFrom(waiter,waiter_show)
importFrom(waiter,waiter_show_on_load)
importFrom(waiter,waiter_update)