{"payload":{"pageCount":3,"repositories":[{"type":"Public","name":"NiChart_Project","owner":"CBICA","isFork":false,"description":"Neuro Imaging Chart of AI-based Imaging Biomarkers","allTopics":[],"primaryLanguage":null,"pullRequestCount":1,"issueCount":2,"starsCount":5,"forksCount":1,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-20T08:25:23.336Z"}},{"type":"Public","name":"NiChart_DLMUSE","owner":"CBICA","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":2,"starsCount":0,"forksCount":4,"license":"Other","participation":[0,3,0,3,0,0,0,0,1,0,0,2,2,0,1,0,5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20,3,5,0,5],"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-16T23:13:44.290Z"}},{"type":"Public","name":"spare_score","owner":"CBICA","isFork":false,"description":"Compute SPARE scores to detect characteristic feature patterns","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":2,"starsCount":0,"forksCount":5,"license":"Other","participation":[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,2,0,0,0,3,0,11,40,21,29,7,1,18],"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-16T19:58:57.320Z"}},{"type":"Public","name":"NiChart_Workflows","owner":"CBICA","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":1,"issueCount":2,"starsCount":0,"forksCount":3,"license":null,"participation":[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10,2,0,8,0,0,0,0,0,32,2,3,0],"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-13T17:53:08.528Z"}},{"type":"Public","name":"NiChart_Viewer","owner":"CBICA","isFork":false,"description":"Visualization tool for Neuroimaging Chart (NiChart) imaging descriptors and biomarkers","allTopics":["nichart"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-07-25T19:23:31.429Z"}},{"type":"Public","name":"SurrealGAN","owner":"CBICA","isFork":true,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":5,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-07-19T09:40:04.254Z"}},{"type":"Public","name":"NiChart_Website","owner":"CBICA","isFork":false,"description":"The Landing page for the NiChart project","allTopics":["visualization","machine-learning","image-processing","neuroimaging","neuroimaging-analysis"],"primaryLanguage":{"name":"JavaScript","color":"#f1e05a"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":3,"license":"Other","participation":[0,2,14,6,0,8,0,1,0,13,0,5,6,34,14,5,21,33,0,0,0,5,1,0,0,0,0,0,4,0,4,0,0,0,0,1,0,0,2,1,0,0,0,0,0,0,0,0,0,0,0,0],"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-25T05:00:53.644Z"}},{"type":"Public","name":"NiChart_Harmonize","owner":"CBICA","isFork":false,"description":"Statistical harmonization package in NiChart","allTopics":["nichart"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"MIT License","participation":[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,2,2,3,0,0,0,0,0,0,0,0,0,0,0,0],"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-24T21:38:33.816Z"}},{"type":"Public","name":"TIP","owner":"CBICA","isFork":false,"description":"Translational Imaging Pipelines","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":2,"starsCount":0,"forksCount":3,"license":"Other","participation":[6,6,3,10,10,1,0,0,0,1,31,14,0,0,0,0,6,0,0,0,1,0,0,13,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0],"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-02-07T22:25:29.580Z"}},{"type":"Public","name":"NiChart_Tissue_Segmentation","owner":"CBICA","isFork":false,"description":"Brain tissue segmentation using FSL FAST and DLICV","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":2,"forksCount":0,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-02-02T23:18:46.930Z"}},{"type":"Public","name":"niCHART","owner":"CBICA","isFork":false,"description":"The neuro-imaging brain aging chart [niCHART] is a comprehensive solution to analyze standard structural and functional brain MRI data across studies. [niCHART] and the associated pre-processing tools implement computational morphometry, functional signal analysis, quality control, statistical harmonization, data standardization, interactive visual","allTopics":["mri","neuroimaging","aging"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":6,"issueCount":17,"starsCount":13,"forksCount":8,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-01-22T12:09:17.441Z"}},{"type":"Public","name":"BRIDGEPORT","owner":"CBICA","isFork":false,"description":"Source for https://www.cbica.upenn.edu/bridgeport and documentation of the GWAS dataset","allTopics":[],"primaryLanguage":{"name":"JavaScript","color":"#f1e05a"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-01-03T23:12:56.952Z"}},{"type":"Public","name":"BrainMaGe","owner":"CBICA","isFork":false,"description":"Brain extraction in presence of abnormalities, using single and multiple MRI modalities","allTopics":["python","machine-learning","deep-learning","pytorch","neuroimaging","segmentation","nih","brain-extraction","skull-stripping","pytorch-lightning"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":4,"issueCount":2,"starsCount":32,"forksCount":7,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-12-09T14:54:52.688Z"}},{"type":"Public","name":"CaPTk","owner":"CBICA","isFork":false,"description":"Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: https://cbica.github.io/CaPTk","allTopics":["cpp","cancer","cpp11","cancer-imaging-research","medical-image-computing","cwl","itcr","radiomics","medical-image-processing","nih","nci","nci-itcr","radiomics-features","cwltool","u24","cbica","machine-learning","analytics","medical-imaging","image-analysis"],"primaryLanguage":{"name":"C++","color":"#f34b7d"},"pullRequestCount":10,"issueCount":161,"starsCount":174,"forksCount":63,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-12-09T00:42:42.471Z"}},{"type":"Public","name":"GBMSurvival_2023","owner":"CBICA","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"MATLAB","color":"#e16737"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":1,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-11-20T02:32:12.915Z"}},{"type":"Public","name":"DLMUSE","owner":"CBICA","isFork":false,"description":"A repository that allows users to apply the DLMUSE method to their brain imaging data.","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-11-09T21:58:33.667Z"}},{"type":"Public","name":"DLICV","owner":"CBICA","isFork":false,"description":"A repository that allows users to apply the DLICV method to their brain imaging data.","allTopics":["deeplearning","medical-image-processing","medical-image-analysis","imagesegmentation","nnunet"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-11-08T19:43:16.923Z"}},{"type":"Public","name":"DeepMRSeg-Models","owner":"CBICA","isFork":false,"description":"","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-09-08T20:11:31.415Z"}},{"type":"Public","name":"RESPOND","owner":"CBICA","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":1,"starsCount":0,"forksCount":2,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-09-06T19:38:12.638Z"}},{"type":"Public","name":"FigureGenerator","owner":"CBICA","isFork":false,"description":"This helps creating high quality figures for use in manuscripts and presentations.","allTopics":["screenshots","medical-imaging","figure-maker","figures","screenshot-generator"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":2,"starsCount":11,"forksCount":2,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-07-11T15:09:25.130Z"}},{"type":"Public template","name":"gandlf_experiments_template","owner":"CBICA","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-05-17T19:00:05.748Z"}},{"type":"Public","name":"Deep-LIBRA","owner":"CBICA","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":6,"starsCount":11,"forksCount":4,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-04-25T13:12:33.755Z"}},{"type":"Public","name":"DeepMRSeg","owner":"CBICA","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":5,"starsCount":6,"forksCount":7,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-04-03T15:54:25.338Z"}},{"type":"Public","name":"BrainSegmenter","owner":"CBICA","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":3,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-03-13T17:38:23.314Z"}},{"type":"Public","name":"cbica.github.io","owner":"CBICA","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-03-07T16:34:25.782Z"}},{"type":"Public","name":"MRISnapshot","owner":"CBICA","isFork":false,"description":"A QC tool for verification of datasets with MRI images and derived masks ","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":4,"forksCount":1,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-03-01T19:22:37.143Z"}},{"type":"Public archive","name":"OPM","owner":"CBICA","isFork":false,"description":"OpenSlide Patch Manager","allTopics":["extractor","patch","patch-generation","histopathology","patch-extraction"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":2,"issueCount":1,"starsCount":4,"forksCount":6,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-02-15T02:10:14.314Z"}},{"type":"Public","name":"MICO","owner":"CBICA","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"C++","color":"#f34b7d"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-01-16T20:44:25.930Z"}},{"type":"Public","name":"qt","owner":"CBICA","isFork":false,"description":"UNCHANGED distribution of Qt_5.10.1 to satisfy license requirement","allTopics":[],"primaryLanguage":null,"pullRequestCount":1,"issueCount":0,"starsCount":0,"forksCount":1,"license":"GNU Lesser General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-11-01T06:41:41.896Z"}},{"type":"Public","name":"MLSeminarSandbox","owner":"CBICA","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":9,"issueCount":0,"starsCount":0,"forksCount":20,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-09-16T04:26:52.191Z"}}],"repositoryCount":66,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"CBICA repositories"}