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    13 repositories

    • reprogramming_ood

      Public
      Out of distribution problem in cell reprogramming revealed.
      Jupyter Notebook
      •
      MIT License
      •2•4•0•0•Updated Jun 23, 2024Jun 23, 2024

    • ComputAge

      Public
      A library for full-stack aging clocks design and benchmarking.
      machine-learningbioinformaticsepigeneticsagingbiomarkerslife-scienceaging-b
      Jupyter Notebook
      •
      Creative Commons Attribution Share Alike 4.0 International
      •2•26•3•2•Updated Jun 10, 2024Jun 10, 2024

    • Methylotl

      Public
      Python
      •
      Creative Commons Attribution Share Alike 4.0 International
      •0•10•0•0•Updated May 27, 2024May 27, 2024

    • computational_aging_course

      Public
      Free online course on computational biology of aging driven by Jupyter book and supported by Skoltech.
      Jupyter Notebook
      •11•14•7•1•Updated Dec 31, 2023Dec 31, 2023

    • ComputBioAge

      Public
      This repo contains code and front-end part for biological age calculation by Klemera & Doubal, 2006 approach which with our carefully selected features which we find the most informative and accessible.
      Jupyter Notebook
      •
      MIT License
      •0•3•1•0•Updated Dec 13, 2023Dec 13, 2023

    • biohack-2023

      Public
      This repository is a storage of results obtained during Bionformatics Hackathon 2023 held in Yerevan.
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Aug 13, 2023Aug 13, 2023

    • quaich_aging

      Public
      Fork of snakemake pipeline for Hi-C post-processing adapted specifically for aging-related data.
      Python
      •
      MIT License
      •6•0•0•0•Updated Jul 31, 2023Jul 31, 2023

    • aging_omics_datasets

      Public
      This repo is for accumulating information of different aging related omics datasets appropriate for meta-analysis and aging clocks train.
      MIT License
      •0•2•0•0•Updated Apr 11, 2023Apr 11, 2023

    • single-cell-methylation-fake

      Public
      Jupyter Notebook
      •
      MIT License
      •1•2•0•0•Updated Dec 22, 2022Dec 22, 2022

    • Intro

      Public
      Our manifest and principles as well as short description of our projects
      0•0•0•0•Updated Sep 18, 2022Sep 18, 2022

    • MethylationClock

      Public
      This repo is for Methylation clocks building and exploration
      Jupyter Notebook
      •0•0•0•0•Updated Feb 14, 2022Feb 14, 2022

    • TranscriptomicClock

      Public
      Gene expression driven deep-learning based aging clock
      Jupyter Notebook
      •0•2•0•0•Updated Nov 14, 2021Nov 14, 2021

    • Strategy

      Public
      Repo for testing git function and planning global strategy (if needed)
      0•0•0•0•Updated Oct 24, 2021Oct 24, 2021