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    6 repositories

    • Transitions

      Public
      Accompanying code for the paper "Global patterns and rates of habitat transitions across the eukaryotic tree of life" (Jamy et al. 2022) on Nature Ecology and Evolution.
      Shell
      •
      MIT License
      •2•3•0•0•Updated Jun 17, 2022Jun 17, 2022

    • Phylogenomics_Data

      Public
      Phylogenomics data and scripts
      Shell
      •0•1•0•0•Updated Jun 1, 2022Jun 1, 2022

    • Ammonia

      Public
      Internal workshop on git, Github and Jupyter - April 2022
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Apr 19, 2022Apr 19, 2022

    • scripts

      Public
      Various scripts used in the Burki Lab
      Python
      •
      MIT License
      •0•0•0•0•Updated Apr 19, 2022Apr 19, 2022

    • juppmaxyter_tunnel

      Public
      This small repo helps to tunnel jupyter lab from UPPMAX. Jupyter can then be used for any preferred kernel.
      Shell
      •0•0•0•0•Updated Apr 16, 2022Apr 16, 2022

    • long-reads

      Public
      Data and scripts for "Long metabarcoding of the eukaryotic rDNA operon to phylogenetically and taxonomically resolve environmental diversity" (Jamy et al. 2019). Duplicated from https://github.com/Pbdas/long-reads
      C++
      •0•0•0•0•Updated Mar 1, 2022Mar 1, 2022