{"payload":{"pageCount":1,"repositories":[{"type":"Public","name":"SCCAF-D","owner":"rnacentre","isFork":false,"description":"Cell type deconvolution","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-09-09T05:52:24.539Z"}},{"type":"Public","name":"SCCAF-D_reproducibility","owner":"rnacentre","isFork":false,"description":"example of applying SCCAF-D","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-09-09T02:30:14.066Z"}},{"type":"Public","name":"DG_SCOmics","owner":"rnacentre","isFork":true,"description":"Maintained by <a class=\"user-mention\" data-hovercard-type=\"user\" data-hovercard-url=\"/users/OOAAHH/hovercard\" data-octo-click=\"hovercard-link-click\" data-octo-dimensions=\"link_type:self\" href=\"https://github.com/OOAAHH\">@OOAAHH</a>(SunHao) .","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-30T07:15:08.395Z"}},{"type":"Public","name":"scDenorm-reproducibility","owner":"rnacentre","isFork":false,"description":"Notebooks for reproduce scDenorm's results","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-26T09:11:26.778Z"}},{"type":"Public","name":"rnacentre.github.io","owner":"rnacentre","isFork":true,"description":"Miao Lab website","allTopics":[],"primaryLanguage":{"name":"SCSS","color":"#c6538c"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1142,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-08-20T14:05:32.527Z"}},{"type":"Public","name":"Kubeflow_pipline_module","owner":"rnacentre","isFork":true,"description":"Kubeflow_pipline_module, use docker as base component, which as an alternative to bioos. Maintained by <a class=\"user-mention\" data-hovercard-type=\"user\" data-hovercard-url=\"/users/OOAAHH/hovercard\" data-octo-click=\"hovercard-link-click\" data-octo-dimensions=\"link_type:self\" href=\"https://github.com/OOAAHH\">@OOAAHH</a>(SunHao) .","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-07-01T02:05:21.952Z"}},{"type":"Public","name":"BCAGitPages","owner":"rnacentre","isFork":true,"description":"","allTopics":[],"primaryLanguage":{"name":"Vue","color":"#41b883"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":6,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-12T03:34:53.579Z"}},{"type":"Public","name":"gznl-rdc","owner":"rnacentre","isFork":false,"description":"GZNL - Respiratory Data Centre: Facilitating Respiratory Disease Research with big data","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":2,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-28T08:43:38.923Z"}},{"type":"Public","name":"BrainCellAtlas-reproducibility","owner":"rnacentre","isFork":false,"description":"Notebooks to reproduce the results of Brain Cell Atlas","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":13,"forksCount":2,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-28T07:10:36.048Z"}},{"type":"Public","name":"WDL_Tools","owner":"rnacentre","isFork":false,"description":"WDL workflow language program, developed for singlecell rna sequencing data analysis, maintained by <a class=\"user-mention\" data-hovercard-type=\"user\" data-hovercard-url=\"/users/OOAAHH/hovercard\" data-octo-click=\"hovercard-link-click\" data-octo-dimensions=\"link_type:self\" href=\"https://github.com/OOAAHH\">@OOAAHH</a>(SunHao) .","allTopics":["python","workflow","bioinformatics","scrna-seq","spatial-analysis","atac-seq","cromwell","wdl-workflow","cellranger","starsolo"],"primaryLanguage":{"name":"WDL","color":"#42f1f4"},"pullRequestCount":0,"issueCount":0,"starsCount":2,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-22T09:05:56.341Z"}},{"type":"Public","name":"RCA_Web","owner":"rnacentre","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Vue","color":"#41b883"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-21T03:33:51.387Z"}},{"type":"Public","name":"cirro_temp","owner":"rnacentre","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"JavaScript","color":"#f1e05a"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-15T03:38:36.310Z"}},{"type":"Public","name":"warp-tools","owner":"rnacentre","isFork":true,"description":"This repository contains all containers that WARP uses.","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":2,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-11T05:20:05.248Z"}},{"type":"Public","name":"RCA_web_cxf","owner":"rnacentre","isFork":true,"description":"","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-29T06:15:19.330Z"}},{"type":"Public","name":"warp","owner":"rnacentre","isFork":true,"description":"WDL Analysis Research Pipelines","allTopics":[],"primaryLanguage":{"name":"WDL","color":"#42f1f4"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":93,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-29T05:46:41.766Z"}},{"type":"Public","name":"scAnnot","owner":"rnacentre","isFork":false,"description":"single cell annotation","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":1,"starsCount":4,"forksCount":0,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-02-21T02:14:56.283Z"}},{"type":"Public","name":"scDenorm","owner":"rnacentre","isFork":true,"description":"scDenorm: a denormalization tool for single-cell transcriptomics data","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":1,"issueCount":0,"starsCount":1,"forksCount":1,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-01-28T06:48:44.411Z"}},{"type":"Public","name":"sccaf","owner":"rnacentre","isFork":true,"description":"Single-Cell Clustering Assessment Framework","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":19,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-11-14T09:40:05.862Z"}},{"type":"Public","name":"test","owner":"rnacentre","isFork":false,"description":"","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-11-14T09:34:26.174Z"}}],"repositoryCount":19,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"rnacentre repositories"}