Path to conda not specified in docker image

[peaceisbetter]

When running Dockerfile.centos7, the docker image gets to step 5/5 and produces an error which indicates that the path to conda is not valid. This means the path either does not exist or the path is not accessible (I do not have admin privileges on the computer I am running this on).

The docker command:
docker build -t tbillah/fsl-6.0.6-centos7 -f Dockerfile.centos7 .

The error:
=> ERROR [5/5] RUN /root/fsl-5.0.11-centos7/fslpython/bin/conda install -y -n fslpython -c conda-forge deprecation==1.* 0.4s

[5/5] RUN /root/fsl-5.0.11-centos7/fslpython/bin/conda install -y -n fslpython -c conda-forge deprecation==1.*:
0.347 /bin/sh: /root/fsl-5.0.11-centos7/fslpython/bin/conda: No such file or directory

Dockerfile.centos7:32

30 |
31 | # apply patch
32 | >>> RUN $FSLDIR/fslpython/bin/conda install -y -n fslpython -c conda-forge deprecation==1.*
33 |
34 |

ERROR: failed to solve: process "/bin/sh -c $FSLDIR/fslpython/bin/conda install -y -n fslpython -c conda-forge deprecation==1.*" did not complete successfully: exit code: 127

[tashrifbillah]

No worries. You just had to open it on my GitHub. This is your fork. If you open it here, I won't get notification.

[tashrifbillah]

I changed the fsl version to 6.0.6, which may be why I am experiencing the issue

You should be correct. As you pointed out, the error is coming from here:

/root/fsl-5.0.11-centos7/fslpython/bin/conda: No such file or directory

That means 6.0.5 moved the conda elsewhere or they came up with a different strategy for building Python packages.

[tashrifbillah]

On second thought, I think conda is in the right place. You are making mistake with directory name. Is /root/fsl-5.0.11-centos7 still the directory where you installed 6.0.5? Carefully examine this, I think you can figure this out. You are close!