From d6bce3ba98662dfc38df6fe800b3854b922f2e58 Mon Sep 17 00:00:00 2001 From: Circle Ci Date: Mon, 13 Jan 2025 06:12:31 +0000 Subject: [PATCH] doc updates [skip ci] --- .../auto_examples_python.zip | Bin 28722 -> 28722 bytes .../intro_causal_graphs.zip | Bin 22097 -> 22097 bytes .../inducing_path.zip | Bin 10236 -> 10236 bytes .../plot_timeseries_graphs.zip | Bin 5390 -> 5390 bytes .../plot_mixed_edge_graph.zip | Bin 13774 -> 13774 bytes .../checking_validity_of_a_pag.zip | Bin 9337 -> 9337 bytes .../auto_examples_jupyter.zip | Bin 38586 -> 38586 bytes ...aw_and_compare_graphs_with_same_layout.zip | Bin 6338 -> 6338 bytes .../sphx_glr_plot_mixed_edge_graph_001.png | Bin 14897 -> 13371 bytes .../sphx_glr_plot_mixed_edge_graph_thumb.png | Bin 11307 -> 10952 bytes .../intro/checking_validity_of_a_pag.rst.txt | 6 ++-- .../auto_examples/intro/inducing_path.rst.txt | 4 +-- .../intro/intro_causal_graphs.rst.txt | 10 +++--- .../intro/sg_execution_times.rst.txt | 16 +++++----- 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zDyMpa5Oh=X2c7b!Owf+x-}-KSsvK#=Ulo*ZVX$xE)c>0T^}iE>)JW(N1`GBM-3<{Q Wy, included_edges=, excluded_edges=, num_distributions=1, obs_distribution=True, intervention_targets=[], symmetric_diff_map={}, sigma_map={}, f_nodes=[], num_domains=1, domain_map={}, s_nodes=[]) + Context(observed_variables={'I', 'G', 'S', 'PSH', 'L'}, latent_variables=set(), state_variables={}, init_graph=, included_edges=, excluded_edges=, num_distributions=1, obs_distribution=True, intervention_targets=[], symmetric_diff_map={}, sigma_map={}, f_nodes=[], num_domains=1, domain_map={}, s_nodes=[]) True @@ -180,7 +180,7 @@ relationship. As such, the resulting graph is no longer a valid PAG. .. code-block:: none ConditioningSetSelection.PDS - Context(observed_variables={'L', 'I', 'PSH', 'G', 'S'}, latent_variables=set(), state_variables={}, init_graph=, included_edges=, excluded_edges=, num_distributions=1, obs_distribution=True, intervention_targets=[], symmetric_diff_map={}, sigma_map={}, f_nodes=[], num_domains=1, domain_map={}, s_nodes=[]) + Context(observed_variables={'I', 'G', 'S', 'PSH', 'L'}, latent_variables=set(), state_variables={}, init_graph=, included_edges=, excluded_edges=, num_distributions=1, obs_distribution=True, intervention_targets=[], symmetric_diff_map={}, sigma_map={}, f_nodes=[], num_domains=1, domain_map={}, s_nodes=[]) False @@ -195,7 +195,7 @@ References .. rst-class:: sphx-glr-timing - **Total running time of the script:** (0 minutes 1.000 seconds) + **Total running time of the script:** (0 minutes 1.029 seconds) **Estimated memory usage:** 166 MB diff --git a/dev/_sources/auto_examples/intro/inducing_path.rst.txt b/dev/_sources/auto_examples/intro/inducing_path.rst.txt index 292e0a332..38f5d1427 100644 --- a/dev/_sources/auto_examples/intro/inducing_path.rst.txt +++ b/dev/_sources/auto_examples/intro/inducing_path.rst.txt @@ -241,9 +241,9 @@ References .. rst-class:: sphx-glr-timing - **Total running time of the script:** (0 minutes 1.062 seconds) + **Total running time of the script:** (0 minutes 1.026 seconds) -**Estimated memory usage:** 165 MB +**Estimated memory usage:** 164 MB .. _sphx_glr_download_auto_examples_intro_inducing_path.py: diff --git a/dev/_sources/auto_examples/intro/intro_causal_graphs.rst.txt b/dev/_sources/auto_examples/intro/intro_causal_graphs.rst.txt index 5675171f7..0aa3e4916 100644 --- a/dev/_sources/auto_examples/intro/intro_causal_graphs.rst.txt +++ b/dev/_sources/auto_examples/intro/intro_causal_graphs.rst.txt @@ -169,7 +169,7 @@ Here, we will simulate some data to understand causal graphs in the context of S .. code-block:: none - Fitting causal models: 0%| | 0/5 [00:00 + @@ -307,7 +307,7 @@ in the graph. These unobserved confounders are graphically depicted with a bidir .. code-block:: none - ['z', 'x'] + ['x', 'z'] The ADMG has confounded-components: [{'x', 'y'}, {'z'}, {'w'}] 'z' is d-separated from 'x': True 'z' is d-separated from 'x' given 'y': False @@ -427,9 +427,9 @@ References .. rst-class:: sphx-glr-timing - **Total running time of the script:** (0 minutes 2.128 seconds) + **Total running time of the script:** (0 minutes 2.232 seconds) -**Estimated memory usage:** 250 MB +**Estimated memory usage:** 249 MB .. _sphx_glr_download_auto_examples_intro_intro_causal_graphs.py: diff --git a/dev/_sources/auto_examples/intro/sg_execution_times.rst.txt b/dev/_sources/auto_examples/intro/sg_execution_times.rst.txt index 2462decd6..a464bc964 100644 --- a/dev/_sources/auto_examples/intro/sg_execution_times.rst.txt +++ b/dev/_sources/auto_examples/intro/sg_execution_times.rst.txt @@ -6,7 +6,7 @@ Computation times ================= -**00:04.190** total execution time for 3 files **from auto_examples/intro**: +**00:04.286** total execution time for 3 files **from auto_examples/intro**: .. container:: @@ -33,11 +33,11 @@ Computation times - Time - Mem (MB) * - :ref:`sphx_glr_auto_examples_intro_intro_causal_graphs.py` (``intro_causal_graphs.py``) - - 00:02.128 - - 249.7 - * - :ref:`sphx_glr_auto_examples_intro_inducing_path.py` (``inducing_path.py``) - - 00:01.062 - - 164.7 + - 00:02.232 + - 249.3 * - :ref:`sphx_glr_auto_examples_intro_checking_validity_of_a_pag.py` (``checking_validity_of_a_pag.py``) - - 00:00.1000 - - 166.1 + - 00:01.029 + - 165.6 + * - :ref:`sphx_glr_auto_examples_intro_inducing_path.py` (``inducing_path.py``) + - 00:01.026 + - 163.9 diff --git a/dev/_sources/auto_examples/mixededge/plot_mixed_edge_graph.rst.txt b/dev/_sources/auto_examples/mixededge/plot_mixed_edge_graph.rst.txt index fce88ec57..9a3e61378 100644 --- a/dev/_sources/auto_examples/mixededge/plot_mixed_edge_graph.rst.txt +++ b/dev/_sources/auto_examples/mixededge/plot_mixed_edge_graph.rst.txt @@ -154,7 +154,7 @@ Mixed Edge Graph Properties MixedEdgeGraph named 'IV Graph' with 3 nodes and 3 edges and 2 edge types is directed: False because there are directed edges. False ['directed', 'bidirected'] - {'directed': , 'bidirected': } + {'directed': , 'bidirected': } @@ -194,7 +194,7 @@ Mixed Edge Graph Operations on Nodes .. code-block:: none - MixedEdgeGraph named 'IV Graph' with 3 nodes and 3 edges and 2 edge types has nodes: ['X', 'Y', 'Z'] + MixedEdgeGraph named 'IV Graph' with 3 nodes and 3 edges and 2 edge types has nodes: ['Y', 'Z', 'X'] Graph has node A: False Now graph has node A: True Graph has node A: False @@ -312,7 +312,7 @@ class properties. Moreover, one can specify the edge type. .. rst-class:: sphx-glr-timing - **Total running time of the script:** (0 minutes 1.232 seconds) + **Total running time of the script:** (0 minutes 1.282 seconds) **Estimated memory usage:** 170 MB diff --git a/dev/_sources/auto_examples/mixededge/sg_execution_times.rst.txt b/dev/_sources/auto_examples/mixededge/sg_execution_times.rst.txt index d68f9432d..1b65e0fe5 100644 --- a/dev/_sources/auto_examples/mixededge/sg_execution_times.rst.txt +++ b/dev/_sources/auto_examples/mixededge/sg_execution_times.rst.txt @@ -6,7 +6,7 @@ Computation times ================= -**00:01.232** total execution time for 1 file **from auto_examples/mixededge**: +**00:01.282** total execution time for 1 file **from auto_examples/mixededge**: .. container:: @@ -33,5 +33,5 @@ Computation times - Time - Mem (MB) * - :ref:`sphx_glr_auto_examples_mixededge_plot_mixed_edge_graph.py` (``plot_mixed_edge_graph.py``) - - 00:01.232 - - 170.3 + - 00:01.282 + - 170.4 diff --git a/dev/_sources/auto_examples/visualization/draw_and_compare_graphs_with_same_layout.rst.txt b/dev/_sources/auto_examples/visualization/draw_and_compare_graphs_with_same_layout.rst.txt index 615f550c3..e173e83d7 100644 --- a/dev/_sources/auto_examples/visualization/draw_and_compare_graphs_with_same_layout.rst.txt +++ b/dev/_sources/auto_examples/visualization/draw_and_compare_graphs_with_same_layout.rst.txt @@ -139,9 +139,9 @@ such as `Dagitty `_. .. rst-class:: sphx-glr-timing - **Total running time of the script:** (0 minutes 0.409 seconds) + **Total running time of the script:** (0 minutes 0.399 seconds) -**Estimated memory usage:** 165 MB +**Estimated memory usage:** 164 MB .. _sphx_glr_download_auto_examples_visualization_draw_and_compare_graphs_with_same_layout.py: diff --git a/dev/_sources/auto_examples/visualization/plot_timeseries_graphs.rst.txt b/dev/_sources/auto_examples/visualization/plot_timeseries_graphs.rst.txt index d38049cd9..5db3cfb52 100644 --- a/dev/_sources/auto_examples/visualization/plot_timeseries_graphs.rst.txt +++ b/dev/_sources/auto_examples/visualization/plot_timeseries_graphs.rst.txt @@ -136,9 +136,9 @@ which creates a nice default layout for time-series graphs. .. rst-class:: sphx-glr-timing - **Total running time of the script:** (0 minutes 0.939 seconds) + **Total running time of the script:** (0 minutes 0.996 seconds) -**Estimated memory usage:** 165 MB +**Estimated memory usage:** 164 MB .. _sphx_glr_download_auto_examples_visualization_plot_timeseries_graphs.py: diff --git a/dev/_sources/auto_examples/visualization/sg_execution_times.rst.txt b/dev/_sources/auto_examples/visualization/sg_execution_times.rst.txt index 246fa0475..fbddb4cb2 100644 --- a/dev/_sources/auto_examples/visualization/sg_execution_times.rst.txt +++ b/dev/_sources/auto_examples/visualization/sg_execution_times.rst.txt @@ -6,7 +6,7 @@ Computation times ================= -**00:01.347** total execution time for 2 files **from auto_examples/visualization**: +**00:01.396** total execution time for 2 files **from auto_examples/visualization**: .. container:: @@ -33,8 +33,8 @@ Computation times - Time - Mem (MB) * - :ref:`sphx_glr_auto_examples_visualization_plot_timeseries_graphs.py` (``plot_timeseries_graphs.py``) - - 00:00.939 - - 164.7 + - 00:00.996 + - 163.9 * - :ref:`sphx_glr_auto_examples_visualization_draw_and_compare_graphs_with_same_layout.py` (``draw_and_compare_graphs_with_same_layout.py``) - - 00:00.409 - - 164.7 + - 00:00.399 + - 163.9 diff --git a/dev/_sources/sg_execution_times.rst.txt b/dev/_sources/sg_execution_times.rst.txt index 906e142e0..1d1e87f14 100644 --- a/dev/_sources/sg_execution_times.rst.txt +++ b/dev/_sources/sg_execution_times.rst.txt @@ -6,7 +6,7 @@ Computation times ================= -**00:06.769** total execution time for 6 files **from all galleries**: +**00:06.964** total execution time for 6 files **from all galleries**: .. container:: @@ -33,20 +33,20 @@ Computation times - Time - Mem (MB) * - :ref:`sphx_glr_auto_examples_intro_intro_causal_graphs.py` (``../examples/intro/intro_causal_graphs.py``) - - 00:02.128 - - 249.7 + - 00:02.232 + - 249.3 * - :ref:`sphx_glr_auto_examples_mixededge_plot_mixed_edge_graph.py` (``../examples/mixededge/plot_mixed_edge_graph.py``) - - 00:01.232 - - 170.3 - * - :ref:`sphx_glr_auto_examples_intro_inducing_path.py` (``../examples/intro/inducing_path.py``) - - 00:01.062 - - 164.7 + - 00:01.282 + - 170.4 * - :ref:`sphx_glr_auto_examples_intro_checking_validity_of_a_pag.py` (``../examples/intro/checking_validity_of_a_pag.py``) - - 00:00.1000 - - 166.1 + - 00:01.029 + - 165.6 + * - :ref:`sphx_glr_auto_examples_intro_inducing_path.py` (``../examples/intro/inducing_path.py``) + - 00:01.026 + - 163.9 * - :ref:`sphx_glr_auto_examples_visualization_plot_timeseries_graphs.py` (``../examples/visualization/plot_timeseries_graphs.py``) - - 00:00.939 - - 164.7 + - 00:00.996 + - 163.9 * - :ref:`sphx_glr_auto_examples_visualization_draw_and_compare_graphs_with_same_layout.py` (``../examples/visualization/draw_and_compare_graphs_with_same_layout.py``) - - 00:00.409 - - 164.7 + - 00:00.399 + - 163.9 diff --git a/dev/auto_examples/intro/checking_validity_of_a_pag.html b/dev/auto_examples/intro/checking_validity_of_a_pag.html index bc79416ad..729a89253 100644 --- a/dev/auto_examples/intro/checking_validity_of_a_pag.html +++ b/dev/auto_examples/intro/checking_validity_of_a_pag.html @@ -539,7 +539,7 @@

Validity of a PAG
ConditioningSetSelection.PDS
-Context(observed_variables={'L', 'I', 'PSH', 'G', 'S'}, latent_variables=set(), state_variables={}, init_graph=<networkx.classes.graph.Graph object at 0x72b46f665490>, included_edges=<networkx.classes.graph.Graph object at 0x72b46f665b90>, excluded_edges=<networkx.classes.graph.Graph object at 0x72b46f665fd0>, num_distributions=1, obs_distribution=True, intervention_targets=[], symmetric_diff_map={}, sigma_map={}, f_nodes=[], num_domains=1, domain_map={}, s_nodes=[])
+Context(observed_variables={'I', 'G', 'S', 'PSH', 'L'}, latent_variables=set(), state_variables={}, init_graph=<networkx.classes.graph.Graph object at 0x72f176698950>, included_edges=<networkx.classes.graph.Graph object at 0x72f176699050>, excluded_edges=<networkx.classes.graph.Graph object at 0x72f176699490>, num_distributions=1, obs_distribution=True, intervention_targets=[], symmetric_diff_map={}, sigma_map={}, f_nodes=[], num_domains=1, domain_map={}, s_nodes=[])
 True
@@ -558,7 +558,7 @@

Validity of a PAG
ConditioningSetSelection.PDS
-Context(observed_variables={'L', 'I', 'PSH', 'G', 'S'}, latent_variables=set(), state_variables={}, init_graph=<networkx.classes.graph.Graph object at 0x72b46f675390>, included_edges=<networkx.classes.graph.Graph object at 0x72b46f675a90>, excluded_edges=<networkx.classes.graph.Graph object at 0x72b46f675ed0>, num_distributions=1, obs_distribution=True, intervention_targets=[], symmetric_diff_map={}, sigma_map={}, f_nodes=[], num_domains=1, domain_map={}, s_nodes=[])
+Context(observed_variables={'I', 'G', 'S', 'PSH', 'L'}, latent_variables=set(), state_variables={}, init_graph=<networkx.classes.graph.Graph object at 0x72f1766a89d0>, included_edges=<networkx.classes.graph.Graph object at 0x72f1766a90d0>, excluded_edges=<networkx.classes.graph.Graph object at 0x72f1766a9510>, num_distributions=1, obs_distribution=True, intervention_targets=[], symmetric_diff_map={}, sigma_map={}, f_nodes=[], num_domains=1, domain_map={}, s_nodes=[])
 False
@@ -574,7 +574,7 @@

ReferencesTotal running time of the script: (0 minutes 1.000 seconds)

+

Total running time of the script: (0 minutes 1.029 seconds)

Estimated memory usage: 166 MB