Error during build in python:3.12-alpine on Apple Silicon

[simepy]

Description of the bug

Hello,
I tried to install pymyPDF in the image python:3.12-alpine but, I run into an error during the build

This is the log:

0.523 Collecting pymupdf (from -r requirements.txt (line 3))
0.534   Downloading PyMuPDF-1.24.9.tar.gz (33.0 MB)
1.168      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 33.0/33.0 MB 55.5 MB/s eta 0:00:00
1.407   Getting requirements to build wheel: started
1.460   Getting requirements to build wheel: finished with status 'done'
1.461   Installing backend dependencies: started
2.913   Installing backend dependencies: finished with status 'done'
2.913   Preparing metadata (pyproject.toml): started
7.647   Preparing metadata (pyproject.toml): finished with status 'error'
7.651   error: subprocess-exited-with-error
7.651
7.651   × Preparing metadata (pyproject.toml) did not run successfully.
7.651   │ exit code: 1
7.651   ╰─> [73 lines of output]
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py: ### Starting.
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py: __name__: 'setup'
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py: platform.platform(): 'Linux-6.10.0-linuxkit-aarch64-with'
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py: platform.python_version(): '3.12.4'
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py: sys.executable: '/usr/local/bin/python'
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py: CPU bits: 64 sys.maxsize=9223372036854775807
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py: __file__: '/tmp/pip-install-_ni49x_p/pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py'
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py: os.getcwd(): '/tmp/pip-install-_ni49x_p/pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d'
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py: sys.argv (3):
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py:     0: '/usr/local/lib/python3.12/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py'
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py:     1: 'prepare_metadata_for_build_wheel'
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py:     2: '/tmp/tmpv36wra_h'
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py: os.environ (15):
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py:     GPG_KEY: '7169605F62C751356D054A26A821E680E5FA6305'
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py:     HOME: '/root'
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py:     LANG: 'C.UTF-8'
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py:     PATH: '/tmp/pip-build-env-2pncg7gt/overlay/bin:/tmp/pip-build-env-2pncg7gt/normal/bin:/usr/local/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin'
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py:     PEP517_BACKEND_PATH: '/tmp/pip-install-_ni49x_p/pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d'
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py:     PEP517_BUILD_BACKEND: 'setup'
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py:     PIP_BUILD_TRACKER: '/tmp/pip-build-tracker-rzc21qrs'
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py:     PWD: '/usr/share/app'
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py:     PYTHONNOUSERSITE: '1'
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py:     PYTHONPATH: '/tmp/pip-build-env-2pncg7gt/site'
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py:     PYTHON_GET_PIP_SHA256: 'ee09098395e42eb1f82ef4acb231a767a6ae85504a9cf9983223df0a7cbd35d7'
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py:     PYTHON_GET_PIP_URL: 'https://github.com/pypa/get-pip/raw/e03e1607ad60522cf34a92e834138eb89f57667c/public/get-pip.py'
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py:     PYTHON_PIP_VERSION: '24.0'
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py:     PYTHON_VERSION: '3.12.4'
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py:     SHLVL: '1'
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py: get_mupdf_internal(): out='dir' location=None sha=None
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py: Download location='https://mupdf.com/downloads/archive/mupdf-1.24.8-source.tar.gz' local_tgz='mupdf-1.24.8-source.tar.gz' name='mupdf-1.24.8-source'
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py: Downloading from location='https://mupdf.com/downloads/archive/mupdf-1.24.8-source.tar.gz' to local_tgz='mupdf-1.24.8-source.tar.gz'.
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py: Extracting mupdf-1.24.8-source.tar.gz
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py: Setting XCFLAGS and XCXXFLAGS to predefine TOFU_CJK_EXT.
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py: Appending `bsymbolic-` to MuPDF build path.
7.651       pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py: Building MuPDF by running: cd /tmp/pip-install-_ni49x_p/pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/mupdf-1.24.8-source && XCFLAGS=-DTOFU_CJK_EXT XCXXFLAGS=-DTOFU_CJK_EXT /usr/local/bin/python ./scripts/mupdfwrap.py -d build/PyMuPDF-aarch64-shared-tesseract-bsymbolic-release -b all && echo /tmp/pip-install-_ni49x_p/pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/mupdf-1.24.8-source/build/PyMuPDF-aarch64-shared-tesseract-bsymbolic-release: && ls -l /tmp/pip-install-_ni49x_p/pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/mupdf-1.24.8-source/build/PyMuPDF-aarch64-shared-tesseract-bsymbolic-release
7.651       (+0.1s): -b: m: __main__.py:1617:build: Building libmupdf.so ...
7.651       (+0.1s): -b: m: __main__.py:1218:_get_m_command: Setting -j to  multiprocessing.cpu_count()=12
7.651       (+0.1s): -b: m: __main__.py:1619:build: running: cd /tmp/pip-install-_ni49x_p/pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/mupdf-1.24.8-source && XLIB_LDFLAGS=-Wl,-Bsymbolic make -j 12 HAVE_GLUT=no HAVE_PTHREAD=yes verbose=yes shared=yes HAVE_LEPTONICA=yes HAVE_TESSERACT=yes build=release build_prefix=PyMuPDF-aarch64-shared-tesseract-bsymbolic-
7.651       (+0.1s): -b: m: __main__.py:1619:build: (+0.1s): -b: m: __main__.py:1619:build: /bin/sh: make: not found
7.651       (+0.1s): -b: m: __main__.py:1619:build: (+0.1s): -b: m: __main__.py:1619:build:
7.651       (+0.1s): -b: m: __main__.py:1619:build: [returned e=127]
7.651       Traceback (most recent call last):
7.651           scripts/mupdfwrap.py:6:<module>(): wrap.__main__.main()
7.651           scripts/wrap/__main__.py:3062:main(): jlib.exception_info()
7.651           ^except raise:
7.651           scripts/wrap/__main__.py:3060:main(): main2()
7.651           scripts/wrap/__main__.py:2445:main2(): build( build_dirs, swig_command, args, vs_upgrade, make_command)
7.651           scripts/wrap/__main__.py:1619:build(): jlib.system( command, prefix=jlib.log_text(), out='log', verbose=1)
7.651           scripts/jlib.py:1700:system(): raise Exception( message)
7.651       Exception: Command failed: cd /tmp/pip-install-_ni49x_p/pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/mupdf-1.24.8-source && XLIB_LDFLAGS=-Wl,-Bsymbolic make -j 12 HAVE_GLUT=no HAVE_PTHREAD=yes verbose=yes shared=yes HAVE_LEPTONICA=yes HAVE_TESSERACT=yes build=release build_prefix=PyMuPDF-aarch64-shared-tesseract-bsymbolic-
7.651       Traceback (most recent call last):
7.651         File "/usr/local/lib/python3.12/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 353, in <module>
7.651           main()
7.651         File "/usr/local/lib/python3.12/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 335, in main
7.651           json_out['return_val'] = hook(**hook_input['kwargs'])
7.651                                    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
7.651         File "/usr/local/lib/python3.12/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 152, in prepare_metadata_for_build_wheel
7.651           whl_basename = backend.build_wheel(metadata_directory, config_settings)
7.651                          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
7.651         File "/tmp/pip-install-_ni49x_p/pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/pipcl.py", line 639, in build_wheel
7.651           items = self._call_fn_build(config_settings)
7.651                   ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
7.651         File "/tmp/pip-install-_ni49x_p/pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/pipcl.py", line 809, in _call_fn_build
7.651           ret = self.fn_build()
7.651                 ^^^^^^^^^^^^^^^
7.651         File "/tmp/pip-install-_ni49x_p/pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py", line 541, in build
7.651           mupdf_build_dir = build_mupdf_unix( mupdf_local, build_type, overwrite_config)
7.651                             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
7.651         File "/tmp/pip-install-_ni49x_p/pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/setup.py", line 852, in build_mupdf_unix
7.651           subprocess.run( command, shell=True, check=True)
7.651         File "/usr/local/lib/python3.12/subprocess.py", line 571, in run
7.651           raise CalledProcessError(retcode, process.args,
7.651       subprocess.CalledProcessError: Command 'cd /tmp/pip-install-_ni49x_p/pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/mupdf-1.24.8-source && XCFLAGS=-DTOFU_CJK_EXT XCXXFLAGS=-DTOFU_CJK_EXT /usr/local/bin/python ./scripts/mupdfwrap.py -d build/PyMuPDF-aarch64-shared-tesseract-bsymbolic-release -b all && echo /tmp/pip-install-_ni49x_p/pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/mupdf-1.24.8-source/build/PyMuPDF-aarch64-shared-tesseract-bsymbolic-release: && ls -l /tmp/pip-install-_ni49x_p/pymupdf_f68f1de610e84bb69e89c1fe86e7ca4d/mupdf-1.24.8-source/build/PyMuPDF-aarch64-shared-tesseract-bsymbolic-release' returned non-zero exit status 1.
7.651       [end of output]

How to reproduce the bug

Build this Dockerfile on Apple Silicon :

FROM python:3.12-alpine

RUN apk add gcc musl-dev
RUN pip install pip --no-cache-dir && pip install pymupdf --no-cache-dir

Note: It's working if I install it with pip directly on the system

System:
MacOS 14.5, M3 Pro

Expected : build correctly

Maybe related to : #3541

PyMuPDF version

1.24.9

Operating system

MacOS

Python version

3.12

[julian-smith-artifex-com]

Wheels for Linux/ARM were missing on pypi.org until a few days ago. So i suspect your pip was trying to build from source, but failed because you don't have development tools installed (specifically make).

I think it should work if you try again. Please let us know how you get on.

[julian-smith-artifex-com]

Note that PyMuPDF is not supported on Linux / aarch64 / musl libc - we do not provide wheels, and the build fails.

So i'll close this now.