v0.7.2: Improved results storage

• added use example for the QIF-SFA model to the documentation
• improved support for pandas.DataFrames as the main results storage data type
• added the pyrates model template as an attribute to the ODESystem
• added the option of clearing all generated fortran/auto files via the ODESystem.close_session() method

v0.7.1: Readthedocs config files

• added readthedocs source files
• improved integration of pycobi and pandas
• some debugging of config files

v0.7.0: Pandas integration

• summaries of parameter continuations are now stored and returned as pandas.DataFrame instances
• added ODESystem.__getitem__ method that allows to directly access parameter continuation summaries via their keys
• added ODESystem.close_session method that changes the working directory of the system to the directory prior to initialization of ODESystem
• added possibility to call pytest scripts with auto-07p directory as additional command line argument (--auto_dir)
• updated gitignore
• added new tests

v0.6.3: CircleCI integration

• added new badges to the readme
• added official support for Python 3.9
• added CircleCI config
• removed bug from the ODESystem.from_yaml method, where the run function was generated for a discrete time-step solver by default

v0.6.2: Updated setup

updated the setup.py such that the PyPI upload does not fail anymore upon compiling the README.md.

v0.6.1: renamed package from PyAuto to PyCoBi

The repository and software package were renamed from PyAuto to PyCoBi (for Python tool for parameter continuation and bifurcation analysis), in order to avoid confusion with the PyPI-registered package pyauto.

v0.6.0: First PyPI release

First PyPI version.

Features of PyAuto:

• wrapper to Auto-07p
• automated fortran file generation via PyRates
• simplified handling of auto environment variables
• simplified parameter continuation
• visualization functions
• save and load results of parameter continuation/bifurcation analysis