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Add the k nearest p-median module and the tutorial example for capacitated p-median #397

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merged 17 commits into from
Oct 3, 2023

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rongboxu
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Hi all! This pull request originates from the feature branch and includes all the commits from PR #387 . It can be identified as the outcome of the GSOC 2023 project.

@rongboxu
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Hi all! I found this PR can't pass the CI test for python 3.9, 3.10 and 3.11, while it can pass the test for python 3.8.
The error happens when running the build_best_tree from pointpats.

The error message is:
if metric in KDTree.valid_metrics: TypeError: argument of type 'builtin_function_or_method' is not iterable.
I found there is one similar issue with this function.

I suppose it may be the version problem of sklearn which the build_best_tree function doesn't correctly define. However, I may need more time to identify the reason.

@jGaboardi
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I am not sure it is a scikit-learn compatibility issue, because current pointpats testing passes with scikit-learn==1.3.0. Did tests pass locally for you?

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@rongboxu
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I am not sure it is a scikit-learn compatibility issue, because current pointpats testing passes with scikit-learn==1.3.0. Did tests pass locally for you?

My local python is 3.8 version, so the test can pass.

rongboxu and others added 4 commits August 22, 2023 12:02
Co-authored-by: James Gaboardi <jgaboardi@gmail.com>
Co-authored-by: James Gaboardi <jgaboardi@gmail.com>
Co-authored-by: James Gaboardi <jgaboardi@gmail.com>
Co-authored-by: James Gaboardi <jgaboardi@gmail.com>
@rongboxu
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I am not very sure, but maybe this can be the reason of the failing of build_best_tree, see this.
The relevant code in the Github is, if metric in kdtree_valid_metrics:, see here.
While, in the test detail, it is if metric in KDTree.valid_metrics:, see here.

@gegen07
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gegen07 commented Aug 22, 2023

I think pointpats was not released after this bug fix by Martin, then it throws this error. I think we should release it first to merge this pull request.

@jGaboardi
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I think pointpats was not released after this bug fix by Martin, then it throws this error. I think we should release it first to merge this pull request.

Correct, @ljwolf mentioned that pysal/pointpats#105 needs to be merged prior to a fresh release of pointpats.

(trigger a CI run)
@jGaboardi
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@gegen07 @ljwolf , with the new pointpats release all tests are passing except the known AZP failure. I think we are good to merge this. Any dissenting opinions?

@gegen07
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gegen07 commented Oct 3, 2023

I think it is good to go.

@jGaboardi jGaboardi merged commit 3f284d9 into pysal:main Oct 3, 2023
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@jGaboardi
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Congrats, @rongboxu!

@rongboxu
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rongboxu commented Oct 3, 2023

Congrats, @rongboxu!

Thank you very much for merging it!

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3 participants