gapp is to build excutables for specific applications of of this packaged. Check the following points before running this command.
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bdlib have been run for building the basic libraiies needed for MD or MC applications.
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For the convenience of access the application sources, make linkes to the directories where the main programs of applications in
ln -s $MSMPSCUSOR/MDLIB/sor/Applications -T $WORKSPACE/mdapps
ln -s $MSMPSCUSOR/MDLIB/sor/Analysis -T $WORKSPACE/mdanaly
ln -s $MSMPSCUSOR/MCLIB/sor/Applications -T $WORKSPACE/mcapps.
for the variables $MSMPSCUSOR and $WORKSPACE, see README.md
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enter to the directories and run gapp. For example:
cd $WORKSPACE/mdapp gapp SUBSTRATE_GPU
to generate the excutable SUBSTRATE.exe, in the dierectory $WORKSPACE/applications.