- extend readSimplePlate to read output of writeData
- use groupStats in viewGroups
- use layout info in viewPlate; eg. plot group2
see https://www.r-bloggers.com/a-simple-example-of-using-replyrgapply/ for approaches to the "split-apply-combine" process
blank correction, base adjustment, colors, IDs, and perhaps fits are all done automatically; perhaps even groupings
plot.plate to viewPlate and viewGroups depending on argument groups and groups2
-> additional plate column in plate layout -> function: mergePlates
- wrapper: write more handy wrapper for grofit
- growthrater: add wrapper for growthrater
- findLag: find the lag and automatically subtract it using shiftData
- addModels: add model parameters to main data structure and use in viewPlate and viewGroups
difference to the longest lag
cellGrowth; and fitted data are added as data$OD$fit and model parameters added
The bioconductor cellGrowth features non-parametric models and automatic bandwith selection.