FUNCTIONALITY: Adding option for output location

[boasvdp]

Currently, output is automatically moved to a folder in the input directory. It would be helpful if the output directory could be specified in the CPgeneProfiler() function.

[ramadatta]

We agree with reviewer’s comment and this issue has been resolved. The output directory could now be specified using cp_summarize command.

For example:
cp_summarize(outdir_loc = "/home/user/test", outdir = "xyz_directory", report="SummaryPlots" , image = "png")

The above command will automatically create a xyz_directory folder under /home/user/test location and transfers all the output files into xyz_directory at the specified location. Please find the details of cp_summarize command from the testData section.