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DESCRIPTION
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DESCRIPTION
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Package: scMD
Type: Package
Title: (single cell Methylation Deconvolution) a cellular deconvolution framework to reliably estimate cell type fractions from tissue-level DNAm data.
Version: 1.0.0
Authors@R: c(
person("Manqi", "Cai", role = c("aut", "cre"),
email = "manqi.cai.mk@gmail.com",
comment = c(ORCID = "0000-0003-3296-1730")
),
person("Jiebiao", "Wang", role = "aut",
comment = c(ORCID = "0000-0003-3828-4400")
)
)
Maintainer: Manqi Cai <manqi.cai.mk@gmail.com>
Description: (single cell Methylation Deconvolution) a cellular deconvolution framework to reliably estimate cell type fractions from tissue-level DNAm data.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Suggests:
rmarkdown
Imports:
EnsDeconv,
EpiDISH,
minfi,
quadprog,
dplyr,
tidyverse,
MIND
Remotes:
randel/scMD,
randel/MIND,
bioc::3.17/EpiDISH,
bioc::3.17/minfi,
url::https://bioconductor.org/packages/3.16/data/annotation/src/contrib/IlluminaHumanMethylation450kanno.ilmn12.hg19_0.6.1.tar.gz
BugReports: https://github.com/randel/scMD/issues
VignetteBuilder: knitr
RoxygenNote: 7.2.1