Fix pip dependencies

.gitignore

@@ -87,3 +87,4 @@ cpp/.idea/
 cpp/cmake-build-debug/
 pylibwholegraph/.idea/
 pylibwholegraph/cmake-build-debug/
+compile_commands.json

dependencies.yaml

@@ -192,21 +192,23 @@ dependencies:
         packages: []
   test_cpp:
     common:
-      - output_types: [conda, requirements]
+      - output_types: [conda]
         packages:
           - nccl
   test_python:
     common:
-      - output_types: [conda, requirements]
+      - output_types: [conda]
         packages:
           - c-compiler
           - cxx-compiler
+          - nccl
+      - output_types: [conda, requirements]
+        packages:
           - ninja
           - numpy>=1.17
           - pytest
           - pytest-forked
           - pytest-xdist
-          - nccl
     specific:
       - output_types: [conda, requirements]
         matrices:
@@ -273,10 +275,12 @@ dependencies:
             packages:
   docs:
     common:
+      - output_types: [conda]
+        packages:
+          - *doxygen
       - output_types: [conda, requirements]
         packages:
           - breathe
-          - *doxygen
           - graphviz
           - ipython
           - ipykernel
@@ -297,10 +301,12 @@ dependencies:
   clang_tools:
     common:
       - output_types: [conda, requirements]
+        packages:
+          - gitpython
+      - output_types: conda
         packages:
           - clangxx==16.0.6
           - clang-tools==16.0.6
-          - gitpython
   python_build_wheel:
     common:
       - output_types: [pyproject]