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DESCRIPTION
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Package: MsBackendTimsTof
Title: Mass spectrometry Data Backend for Bruker TimsTOF Files
Version: 0.1.5
Authors@R:
c(person(given = "Johannes", family = "Rainer",
email = "Johannes.Rainer@eurac.edu",
role = c("aut", "cre"),
comment = c(ORCID = "0000-0002-6977-7147")),
person(given = "Andrea", family = "Vicini",
email = "andrea.vicini@eurac.edu",
role = "aut",
comment = c(ORCID = "0000-0001-9438-6909")),
person(given = "Steffen", family = "Neumann",
email = "sneumann@ipb-halle.de",
role = "ctb",
comment = c(ORCID = "0000-0002-7899-7192")),
person(given = "Carolin", family = "Huber",
email = "carolin-elisabeth.huber@ufz.de",
role = c("ctb"),
comment = c(ORCID = "0000-0002-9355-8948")))
Description: Mass spectrometry (MS) data backend supporting import and
export of (ion mobility) MS data from Bruker TimsTOF files.
The backend uses the opentimsr package which relies on the
proprietory vendor C++ library for raw data access. The
backend thus supports import of MS data from the original
raw data files.
Depends:
R (>= 4.1),
Spectra (>= 1.5.17)
Imports:
IRanges,
BiocParallel,
methods,
opentimsr (>= 1.0.11),
MsCoreUtils,
S4Vectors,
ProtGenerics
Suggests:
testthat,
knitr (>= 1.1.0),
roxygen2,
BiocStyle (>= 2.5.19),
rmarkdown
Remotes:
michalsta/opentims/opentimsr
License: Artistic-2.0
LazyData: yes
Encoding: UTF-8
VignetteBuilder: knitr
BugReports: https://github.com/RforMassSpectrometry/MsBackendTimsTof/issues
URL: https://github.com/RforMassSpectrometry/MsBackendTimsTof
biocViews: Infrastructure, MassSpectrometry, Metabolomics, DataImport
Roxygen: list(markdown=TRUE)
RoxygenNote: 7.2.3