diff --git a/mypy.ini b/mypy.ini
index 35112aed5..1c2194b85 100644
--- a/mypy.ini
+++ b/mypy.ini
@@ -6,7 +6,11 @@ ignore_missing_imports = True
 # Enable options equivalent to the --strict command line arg
 warn_unused_configs = True
 disallow_subclassing_any = True
-disallow_any_generics = True
+
+# numpy expects generic arguments for `numpy.ndarray` that default
+# to `typing.Any` and we use those defaults all over the place.
+disallow_any_generics = False
+
 disallow_untyped_calls = True
 disallow_untyped_defs = True
 disallow_incomplete_defs = True
diff --git a/poetry.lock b/poetry.lock
index cdd8121dd..bcd5101a6 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -7,32 +7,34 @@ optional = true
 python-versions = "*"
 
 [[package]]
-name = "appdirs"
-version = "1.4.4"
-description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"."
-category = "dev"
+name = "anyio"
+version = "3.6.1"
+description = "High level compatibility layer for multiple asynchronous event loop implementations"
+category = "main"
 optional = false
-python-versions = "*"
+python-versions = ">=3.6.2"
+
+[package.dependencies]
+idna = ">=2.8"
+sniffio = ">=1.1"
+typing-extensions = {version = "*", markers = "python_version < \"3.8\""}
+
+[package.extras]
+doc = ["packaging", "sphinx-rtd-theme", "sphinx-autodoc-typehints (>=1.2.0)"]
+test = ["coverage[toml] (>=4.5)", "hypothesis (>=4.0)", "pytest (>=7.0)", "pytest-mock (>=3.6.1)", "trustme", "contextlib2", "uvloop (<0.15)", "mock (>=4)", "uvloop (>=0.15)"]
+trio = ["trio (>=0.16)"]
 
 [[package]]
 name = "appnope"
-version = "0.1.2"
+version = "0.1.3"
 description = "Disable App Nap on macOS >= 10.9"
 category = "main"
 optional = true
 python-versions = "*"
 
-[[package]]
-name = "async-generator"
-version = "1.10"
-description = "Async generators and context managers for Python 3.5+"
-category = "main"
-optional = true
-python-versions = ">=3.5"
-
 [[package]]
 name = "atomicwrites"
-version = "1.4.0"
+version = "1.4.1"
 description = "Atomic file writes."
 category = "dev"
 optional = false
@@ -54,11 +56,11 @@ tests_no_zope = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>
 
 [[package]]
 name = "babel"
-version = "2.9.1"
+version = "2.10.3"
 description = "Internationalization utilities"
 category = "main"
 optional = true
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
+python-versions = ">=3.6"
 
 [package.dependencies]
 pytz = ">=2015.7"
@@ -71,52 +73,71 @@ category = "main"
 optional = true
 python-versions = "*"
 
+[[package]]
+name = "beautifulsoup4"
+version = "4.11.1"
+description = "Screen-scraping library"
+category = "main"
+optional = true
+python-versions = ">=3.6.0"
+
+[package.dependencies]
+soupsieve = ">1.2"
+
+[package.extras]
+html5lib = ["html5lib"]
+lxml = ["lxml"]
+
 [[package]]
 name = "black"
-version = "20.8b1"
+version = "22.8.0"
 description = "The uncompromising code formatter."
 category = "dev"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.6.2"
 
 [package.dependencies]
-appdirs = "*"
-click = ">=7.1.2"
+click = ">=8.0.0"
 mypy-extensions = ">=0.4.3"
-pathspec = ">=0.6,<1"
-regex = ">=2020.1.8"
-toml = ">=0.10.1"
-typed-ast = ">=1.4.0"
-typing-extensions = ">=3.7.4"
+pathspec = ">=0.9.0"
+platformdirs = ">=2"
+tomli = {version = ">=1.1.0", markers = "python_full_version < \"3.11.0a7\""}
+typed-ast = {version = ">=1.4.2", markers = "python_version < \"3.8\" and implementation_name == \"cpython\""}
+typing-extensions = {version = ">=3.10.0.0", markers = "python_version < \"3.10\""}
 
 [package.extras]
 colorama = ["colorama (>=0.4.3)"]
-d = ["aiohttp (>=3.3.2)", "aiohttp-cors"]
+d = ["aiohttp (>=3.7.4)"]
+jupyter = ["ipython (>=7.8.0)", "tokenize-rt (>=3.2.0)"]
+uvloop = ["uvloop (>=0.15.2)"]
 
 [[package]]
 name = "bleach"
-version = "3.3.0"
+version = "5.0.1"
 description = "An easy safelist-based HTML-sanitizing tool."
 category = "main"
 optional = true
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
+python-versions = ">=3.7"
 
 [package.dependencies]
-packaging = "*"
 six = ">=1.9.0"
 webencodings = "*"
 
+[package.extras]
+css = ["tinycss2 (>=1.1.0,<1.2)"]
+dev = ["build (==0.8.0)", "flake8 (==4.0.1)", "hashin (==0.17.0)", "pip-tools (==6.6.2)", "pytest (==7.1.2)", "Sphinx (==4.3.2)", "tox (==3.25.0)", "twine (==4.0.1)", "wheel (==0.37.1)", "black (==22.3.0)", "mypy (==0.961)"]
+
 [[package]]
 name = "certifi"
-version = "2021.5.30"
+version = "2022.9.24"
 description = "Python package for providing Mozilla's CA Bundle."
 category = "main"
 optional = false
-python-versions = "*"
+python-versions = ">=3.6"
 
 [[package]]
 name = "cffi"
-version = "1.14.5"
+version = "1.15.1"
 description = "Foreign Function Interface for Python calling C code."
 category = "main"
 optional = false
@@ -126,20 +147,23 @@ python-versions = "*"
 pycparser = "*"
 
 [[package]]
-name = "chardet"
-version = "4.0.0"
-description = "Universal encoding detector for Python 2 and 3"
+name = "charset-normalizer"
+version = "2.1.1"
+description = "The Real First Universal Charset Detector. Open, modern and actively maintained alternative to Chardet."
 category = "main"
 optional = true
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
+python-versions = ">=3.6.0"
+
+[package.extras]
+unicode_backport = ["unicodedata2"]
 
 [[package]]
 name = "click"
-version = "8.0.1"
+version = "8.1.3"
 description = "Composable command line interface toolkit"
 category = "dev"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
 
 [package.dependencies]
 colorama = {version = "*", markers = "platform_system == \"Windows\""}
@@ -147,7 +171,7 @@ importlib-metadata = {version = "*", markers = "python_version < \"3.8\""}
 
 [[package]]
 name = "colorama"
-version = "0.4.4"
+version = "0.4.5"
 description = "Cross-platform colored terminal text."
 category = "main"
 optional = false
@@ -162,26 +186,26 @@ optional = true
 python-versions = "*"
 
 [package.extras]
-test = ["flake8 (==3.7.8)", "hypothesis (==3.55.3)"]
+test = ["hypothesis (==3.55.3)", "flake8 (==3.7.8)"]
 
 [[package]]
 name = "coverage"
-version = "5.5"
+version = "6.5.0"
 description = "Code coverage measurement for Python"
 category = "dev"
 optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, <4"
+python-versions = ">=3.7"
 
 [package.extras]
-toml = ["toml"]
+toml = ["tomli"]
 
 [[package]]
 name = "decorator"
-version = "4.4.2"
+version = "5.1.1"
 description = "Decorators for Humans"
 category = "main"
 optional = false
-python-versions = ">=2.6, !=3.0.*, !=3.1.*"
+python-versions = ">=3.5"
 
 [[package]]
 name = "defusedxml"
@@ -201,11 +225,11 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 
 [[package]]
 name = "entrypoints"
-version = "0.3"
+version = "0.4"
 description = "Discover and load entry points from installed packages."
 category = "main"
 optional = true
-python-versions = ">=2.7"
+python-versions = ">=3.6"
 
 [[package]]
 name = "execnet"
@@ -218,6 +242,17 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 [package.extras]
 testing = ["pre-commit"]
 
+[[package]]
+name = "fastjsonschema"
+version = "2.16.2"
+description = "Fastest Python implementation of JSON schema"
+category = "main"
+optional = true
+python-versions = "*"
+
+[package.extras]
+devel = ["colorama", "jsonschema", "json-spec", "pylint", "pytest", "pytest-benchmark", "pytest-cache", "validictory"]
+
 [[package]]
 name = "flake8"
 version = "3.9.2"
@@ -234,67 +269,72 @@ pyflakes = ">=2.3.0,<2.4.0"
 
 [[package]]
 name = "freezegun"
-version = "1.1.0"
+version = "1.2.2"
 description = "Let your Python tests travel through time"
 category = "dev"
 optional = false
-python-versions = ">=3.5"
+python-versions = ">=3.6"
 
 [package.dependencies]
 python-dateutil = ">=2.7"
 
 [[package]]
 name = "h11"
-version = "0.9.0"
+version = "0.12.0"
 description = "A pure-Python, bring-your-own-I/O implementation of HTTP/1.1"
 category = "main"
 optional = false
-python-versions = "*"
+python-versions = ">=3.6"
 
 [[package]]
 name = "httpcore"
-version = "0.11.1"
+version = "0.15.0"
 description = "A minimal low-level HTTP client."
 category = "main"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
 
 [package.dependencies]
-h11 = ">=0.8,<0.10"
+anyio = ">=3.0.0,<4.0.0"
+certifi = "*"
+h11 = ">=0.11,<0.13"
 sniffio = ">=1.0.0,<2.0.0"
 
 [package.extras]
-http2 = ["h2 (>=3.0.0,<4.0.0)"]
+http2 = ["h2 (>=3,<5)"]
+socks = ["socksio (>=1.0.0,<2.0.0)"]
 
 [[package]]
 name = "httpx"
-version = "0.15.5"
+version = "0.23.0"
 description = "The next generation HTTP client."
 category = "main"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
 
 [package.dependencies]
 certifi = "*"
-httpcore = ">=0.11.0,<0.12.0"
+httpcore = ">=0.15.0,<0.16.0"
 rfc3986 = {version = ">=1.3,<2", extras = ["idna2008"]}
 sniffio = "*"
 
 [package.extras]
-brotli = ["brotlipy (>=0.7.0,<0.8.0)"]
-http2 = ["h2 (>=3.0.0,<4.0.0)"]
+brotli = ["brotlicffi", "brotli"]
+cli = ["click (>=8.0.0,<9.0.0)", "rich (>=10,<13)", "pygments (>=2.0.0,<3.0.0)"]
+http2 = ["h2 (>=3,<5)"]
+socks = ["socksio (>=1.0.0,<2.0.0)"]
 
 [[package]]
 name = "idna"
-version = "2.10"
+version = "3.4"
 description = "Internationalized Domain Names in Applications (IDNA)"
 category = "main"
 optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
+python-versions = ">=3.5"
 
 [[package]]
 name = "imagesize"
-version = "1.2.0"
+version = "1.4.1"
 description = "Getting image size from png/jpeg/jpeg2000/gif file"
 category = "main"
 optional = true
@@ -317,6 +357,21 @@ docs = ["sphinx", "jaraco.packaging (>=9)", "rst.linker (>=1.9)"]
 perf = ["ipython"]
 testing = ["pytest (>=6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-cov", "pytest-enabler (>=1.3)", "packaging", "pyfakefs", "flufl.flake8", "pytest-perf (>=0.9.2)", "pytest-black (>=0.3.7)", "pytest-mypy (>=0.9.1)", "importlib-resources (>=1.3)"]
 
+[[package]]
+name = "importlib-resources"
+version = "5.9.0"
+description = "Read resources from Python packages"
+category = "main"
+optional = true
+python-versions = ">=3.7"
+
+[package.dependencies]
+zipp = {version = ">=3.1.0", markers = "python_version < \"3.10\""}
+
+[package.extras]
+docs = ["sphinx", "jaraco.packaging (>=9)", "rst.linker (>=1.9)", "jaraco.tidelift (>=1.4)"]
+testing = ["pytest (>=6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-black (>=0.3.7)", "pytest-mypy (>=0.9.1)"]
+
 [[package]]
 name = "iniconfig"
 version = "1.1.1"
@@ -327,7 +382,7 @@ python-versions = "*"
 
 [[package]]
 name = "ipython"
-version = "7.24.1"
+version = "7.34.0"
 description = "IPython: Productive Interactive Computing"
 category = "main"
 optional = true
@@ -357,17 +412,9 @@ parallel = ["ipyparallel"]
 qtconsole = ["qtconsole"]
 test = ["nose (>=0.10.1)", "requests", "testpath", "pygments", "nbformat", "ipykernel", "numpy (>=1.17)"]
 
-[[package]]
-name = "ipython-genutils"
-version = "0.2.0"
-description = "Vestigial utilities from IPython"
-category = "main"
-optional = true
-python-versions = "*"
-
 [[package]]
 name = "iso8601"
-version = "1.0.2"
+version = "1.1.0"
 description = "Simple module to parse ISO 8601 dates"
 category = "main"
 optional = false
@@ -375,7 +422,7 @@ python-versions = ">=3.6.2,<4.0"
 
 [[package]]
 name = "jedi"
-version = "0.18.0"
+version = "0.18.1"
 description = "An autocompletion tool for Python that can be used for text editors."
 category = "main"
 optional = true
@@ -386,15 +433,15 @@ parso = ">=0.8.0,<0.9.0"
 
 [package.extras]
 qa = ["flake8 (==3.8.3)", "mypy (==0.782)"]
-testing = ["Django (<3.1)", "colorama", "docopt", "pytest (<6.0.0)"]
+testing = ["Django (<3.1)", "colorama", "docopt", "pytest (<7.0.0)"]
 
 [[package]]
 name = "jinja2"
-version = "3.0.1"
+version = "3.1.2"
 description = "A very fast and expressive template engine."
 category = "main"
 optional = true
-python-versions = ">=3.6"
+python-versions = ">=3.7"
 
 [package.dependencies]
 MarkupSafe = ">=2.0"
@@ -404,64 +451,67 @@ i18n = ["Babel (>=2.7)"]
 
 [[package]]
 name = "jsonschema"
-version = "3.2.0"
+version = "4.16.0"
 description = "An implementation of JSON Schema validation for Python"
 category = "main"
 optional = true
-python-versions = "*"
+python-versions = ">=3.7"
 
 [package.dependencies]
 attrs = ">=17.4.0"
 importlib-metadata = {version = "*", markers = "python_version < \"3.8\""}
-pyrsistent = ">=0.14.0"
-six = ">=1.11.0"
+importlib-resources = {version = ">=1.4.0", markers = "python_version < \"3.9\""}
+pkgutil-resolve-name = {version = ">=1.3.10", markers = "python_version < \"3.9\""}
+pyrsistent = ">=0.14.0,<0.17.0 || >0.17.0,<0.17.1 || >0.17.1,<0.17.2 || >0.17.2"
+typing-extensions = {version = "*", markers = "python_version < \"3.8\""}
 
 [package.extras]
-format = ["idna", "jsonpointer (>1.13)", "rfc3987", "strict-rfc3339", "webcolors"]
-format_nongpl = ["idna", "jsonpointer (>1.13)", "webcolors", "rfc3986-validator (>0.1.0)", "rfc3339-validator"]
+format = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3987", "uri-template", "webcolors (>=1.11)"]
+format-nongpl = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3986-validator (>0.1.0)", "uri-template", "webcolors (>=1.11)"]
 
 [[package]]
 name = "jupyter-client"
-version = "6.2.0"
+version = "7.3.5"
 description = "Jupyter protocol implementation and client libraries"
 category = "main"
 optional = true
-python-versions = ">=3.6.1"
+python-versions = ">=3.7"
 
 [package.dependencies]
-jupyter-core = ">=4.6.0"
-nest-asyncio = ">=1.5"
-python-dateutil = ">=2.1"
-pyzmq = ">=13"
-tornado = ">=4.1"
+entrypoints = "*"
+jupyter-core = ">=4.9.2"
+nest-asyncio = ">=1.5.4"
+python-dateutil = ">=2.8.2"
+pyzmq = ">=23.0"
+tornado = ">=6.2"
 traitlets = "*"
 
 [package.extras]
-doc = ["sphinx (>=1.3.6)", "sphinx-rtd-theme", "sphinxcontrib-github-alt"]
-test = ["async-generator", "ipykernel", "ipython", "mock", "pytest-asyncio", "pytest-timeout", "pytest", "mypy", "pre-commit", "jedi (<0.18)"]
+doc = ["ipykernel", "myst-parser", "sphinx-rtd-theme", "sphinx (>=1.3.6)", "sphinxcontrib-github-alt"]
+test = ["codecov", "coverage", "ipykernel (>=6.5)", "ipython", "mypy", "pre-commit", "pytest", "pytest-asyncio (>=0.18)", "pytest-cov", "pytest-timeout"]
 
 [[package]]
 name = "jupyter-core"
-version = "4.7.1"
+version = "4.11.1"
 description = "Jupyter core package. A base package on which Jupyter projects rely."
 category = "main"
 optional = true
-python-versions = ">=3.6"
+python-versions = ">=3.7"
 
 [package.dependencies]
-pywin32 = {version = ">=1.0", markers = "sys_platform == \"win32\""}
+pywin32 = {version = ">=1.0", markers = "sys_platform == \"win32\" and platform_python_implementation != \"PyPy\""}
 traitlets = "*"
 
+[package.extras]
+test = ["ipykernel", "pre-commit", "pytest", "pytest-cov", "pytest-timeout"]
+
 [[package]]
 name = "jupyterlab-pygments"
-version = "0.1.2"
+version = "0.2.2"
 description = "Pygments theme using JupyterLab CSS variables"
 category = "main"
 optional = true
-python-versions = "*"
-
-[package.dependencies]
-pygments = ">=2.4.1,<3"
+python-versions = ">=3.7"
 
 [[package]]
 name = "lark"
@@ -476,17 +526,31 @@ atomic_cache = ["atomicwrites"]
 nearley = ["js2py"]
 regex = ["regex"]
 
+[[package]]
+name = "lxml"
+version = "4.9.1"
+description = "Powerful and Pythonic XML processing library combining libxml2/libxslt with the ElementTree API."
+category = "main"
+optional = true
+python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, != 3.4.*"
+
+[package.extras]
+cssselect = ["cssselect (>=0.7)"]
+html5 = ["html5lib"]
+htmlsoup = ["beautifulsoup4"]
+source = ["Cython (>=0.29.7)"]
+
 [[package]]
 name = "markupsafe"
-version = "2.0.1"
+version = "2.1.1"
 description = "Safely add untrusted strings to HTML/XML markup."
 category = "main"
 optional = true
-python-versions = ">=3.6"
+python-versions = ">=3.7"
 
 [[package]]
 name = "matplotlib-inline"
-version = "0.1.2"
+version = "0.1.6"
 description = "Inline Matplotlib backend for Jupyter"
 category = "main"
 optional = true
@@ -505,8 +569,8 @@ python-versions = "*"
 
 [[package]]
 name = "mistune"
-version = "0.8.4"
-description = "The fastest markdown parser in pure Python"
+version = "2.0.4"
+description = "A sane Markdown parser with useful plugins and renderers"
 category = "main"
 optional = true
 python-versions = "*"
@@ -521,19 +585,22 @@ python-versions = "*"
 
 [[package]]
 name = "mypy"
-version = "0.740"
+version = "0.981"
 description = "Optional static typing for Python"
 category = "dev"
 optional = false
-python-versions = ">=3.5"
+python-versions = ">=3.7"
 
 [package.dependencies]
-mypy-extensions = ">=0.4.0,<0.5.0"
-typed-ast = ">=1.4.0,<1.5.0"
-typing-extensions = ">=3.7.4"
+mypy-extensions = ">=0.4.3"
+tomli = {version = ">=1.1.0", markers = "python_version < \"3.11\""}
+typed-ast = {version = ">=1.4.0,<2", markers = "python_version < \"3.8\""}
+typing-extensions = ">=3.10"
 
 [package.extras]
 dmypy = ["psutil (>=4.0)"]
+python2 = ["typed-ast (>=1.4.0,<2)"]
+reports = ["lxml"]
 
 [[package]]
 name = "mypy-extensions"
@@ -545,75 +612,79 @@ python-versions = "*"
 
 [[package]]
 name = "nbclient"
-version = "0.5.3"
+version = "0.6.8"
 description = "A client library for executing notebooks. Formerly nbconvert's ExecutePreprocessor."
 category = "main"
 optional = true
-python-versions = ">=3.6.1"
+python-versions = ">=3.7.0"
 
 [package.dependencies]
-async-generator = "*"
 jupyter-client = ">=6.1.5"
 nbformat = ">=5.0"
 nest-asyncio = "*"
-traitlets = ">=4.2"
+traitlets = ">=5.2.2"
 
 [package.extras]
-dev = ["codecov", "coverage", "ipython", "ipykernel", "ipywidgets", "pytest (>=4.1)", "pytest-cov (>=2.6.1)", "check-manifest", "flake8", "mypy", "tox", "bumpversion", "xmltodict", "pip (>=18.1)", "wheel (>=0.31.0)", "setuptools (>=38.6.0)", "twine (>=1.11.0)", "black"]
-sphinx = ["Sphinx (>=1.7)", "sphinx-book-theme", "mock", "moto", "myst-parser"]
-test = ["codecov", "coverage", "ipython", "ipykernel", "ipywidgets", "pytest (>=4.1)", "pytest-cov (>=2.6.1)", "check-manifest", "flake8", "mypy", "tox", "bumpversion", "xmltodict", "pip (>=18.1)", "wheel (>=0.31.0)", "setuptools (>=38.6.0)", "twine (>=1.11.0)", "black"]
+sphinx = ["autodoc-traits", "mock", "moto", "myst-parser", "Sphinx (>=1.7)", "sphinx-book-theme"]
+test = ["black", "check-manifest", "flake8", "ipykernel", "ipython", "ipywidgets", "mypy", "nbconvert", "pip (>=18.1)", "pre-commit", "pytest (>=4.1)", "pytest-asyncio", "pytest-cov (>=2.6.1)", "setuptools (>=60.0)", "testpath", "twine (>=1.11.0)", "xmltodict"]
 
 [[package]]
 name = "nbconvert"
-version = "6.1.0"
+version = "7.0.0"
 description = "Converting Jupyter Notebooks"
 category = "main"
 optional = true
 python-versions = ">=3.7"
 
 [package.dependencies]
+beautifulsoup4 = "*"
 bleach = "*"
 defusedxml = "*"
-entrypoints = ">=0.2.2"
-jinja2 = ">=2.4"
-jupyter-core = "*"
+importlib-metadata = {version = ">=3.6", markers = "python_version < \"3.10\""}
+jinja2 = ">=3.0"
+jupyter-core = ">=4.7"
 jupyterlab-pygments = "*"
-mistune = ">=0.8.1,<2"
-nbclient = ">=0.5.0,<0.6.0"
-nbformat = ">=4.4"
+lxml = "*"
+markupsafe = ">=2.0"
+mistune = ">=2.0.3,<3"
+nbclient = ">=0.5.0"
+nbformat = ">=5.1"
+packaging = "*"
 pandocfilters = ">=1.4.1"
 pygments = ">=2.4.1"
-testpath = "*"
+tinycss2 = "*"
 traitlets = ">=5.0"
 
 [package.extras]
-all = ["pytest", "pytest-cov", "pytest-dependency", "ipykernel", "ipywidgets (>=7)", "pyppeteer (==0.2.2)", "tornado (>=4.0)", "sphinx (>=1.5.1)", "sphinx-rtd-theme", "nbsphinx (>=0.2.12)", "ipython"]
-docs = ["sphinx (>=1.5.1)", "sphinx-rtd-theme", "nbsphinx (>=0.2.12)", "ipython"]
-serve = ["tornado (>=4.0)"]
-test = ["pytest", "pytest-cov", "pytest-dependency", "ipykernel", "ipywidgets (>=7)", "pyppeteer (==0.2.2)"]
-webpdf = ["pyppeteer (==0.2.2)"]
+all = ["ipykernel", "ipython", "ipywidgets (>=7)", "nbsphinx (>=0.2.12)", "pre-commit", "pyppeteer (>=1,<1.1)", "pyqtwebengine (>=5.15)", "pytest", "pytest-cov", "pytest-dependency", "sphinx-rtd-theme", "sphinx (==5.0.2)", "tornado (>=6.1)"]
+docs = ["ipython", "nbsphinx (>=0.2.12)", "sphinx-rtd-theme", "sphinx (==5.0.2)"]
+qtpdf = ["pyqtwebengine (>=5.15)"]
+qtpng = ["pyqtwebengine (>=5.15)"]
+serve = ["tornado (>=6.1)"]
+test = ["ipykernel", "ipywidgets (>=7)", "pre-commit", "pyppeteer (>=1,<1.1)", "pytest", "pytest-cov", "pytest-dependency"]
+webpdf = ["pyppeteer (>=1,<1.1)"]
 
 [[package]]
 name = "nbformat"
-version = "5.1.3"
+version = "5.6.1"
 description = "The Jupyter Notebook format"
 category = "main"
 optional = true
-python-versions = ">=3.5"
+python-versions = ">=3.7"
 
 [package.dependencies]
-ipython-genutils = "*"
-jsonschema = ">=2.4,<2.5.0 || >2.5.0"
+fastjsonschema = "*"
+importlib-metadata = {version = ">=3.6", markers = "python_version < \"3.8\""}
+jsonschema = ">=2.6"
 jupyter-core = "*"
-traitlets = ">=4.1"
+traitlets = ">=5.1"
 
 [package.extras]
-fast = ["fastjsonschema"]
-test = ["check-manifest", "fastjsonschema", "testpath", "pytest", "pytest-cov"]
+test = ["check-manifest", "pep440", "pre-commit", "pytest", "testpath"]
 
 [[package]]
 name = "nbsphinx"
-version = "0.8.6"
+version = "0.8.9"
 description = "Jupyter Notebook Tools for Sphinx"
 category = "main"
 optional = true
@@ -625,11 +696,11 @@ jinja2 = "*"
 nbconvert = "!=5.4"
 nbformat = "*"
 sphinx = ">=1.8"
-traitlets = "*"
+traitlets = ">=5"
 
 [[package]]
 name = "nest-asyncio"
-version = "1.5.1"
+version = "1.5.5"
 description = "Patch asyncio to allow nested event loops"
 category = "main"
 optional = true
@@ -637,31 +708,22 @@ python-versions = ">=3.5"
 
 [[package]]
 name = "networkx"
-version = "2.5.1"
+version = "2.6.3"
 description = "Python package for creating and manipulating graphs and networks"
 category = "main"
 optional = false
-python-versions = ">=3.6"
-
-[package.dependencies]
-decorator = ">=4.3,<5"
+python-versions = ">=3.7"
 
 [package.extras]
-all = ["numpy", "scipy", "pandas", "matplotlib", "pygraphviz", "pydot", "pyyaml", "lxml", "pytest"]
-gdal = ["gdal"]
-lxml = ["lxml"]
-matplotlib = ["matplotlib"]
-numpy = ["numpy"]
-pandas = ["pandas"]
-pydot = ["pydot"]
-pygraphviz = ["pygraphviz"]
-pytest = ["pytest"]
-pyyaml = ["pyyaml"]
-scipy = ["scipy"]
+default = ["numpy (>=1.19)", "scipy (>=1.5,!=1.6.1)", "matplotlib (>=3.3)", "pandas (>=1.1)"]
+developer = ["black (==21.5b1)", "pre-commit (>=2.12)"]
+doc = ["sphinx (>=4.0,<5.0)", "pydata-sphinx-theme (>=0.6,<1.0)", "sphinx-gallery (>=0.9,<1.0)", "numpydoc (>=1.1)", "pillow (>=8.2)", "nb2plots (>=0.6)", "texext (>=0.6.6)"]
+extra = ["lxml (>=4.5)", "pygraphviz (>=1.7)", "pydot (>=1.4.1)"]
+test = ["pytest (>=6.2)", "pytest-cov (>=2.12)", "codecov (>=2.1)"]
 
 [[package]]
 name = "numpy"
-version = "1.20.3"
+version = "1.21.1"
 description = "NumPy is the fundamental package for array computing with Python."
 category = "main"
 optional = false
@@ -669,18 +731,18 @@ python-versions = ">=3.7"
 
 [[package]]
 name = "packaging"
-version = "20.9"
+version = "21.3"
 description = "Core utilities for Python packages"
 category = "main"
 optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
+python-versions = ">=3.6"
 
 [package.dependencies]
-pyparsing = ">=2.0.2"
+pyparsing = ">=2.0.2,<3.0.5 || >3.0.5"
 
 [[package]]
 name = "pandocfilters"
-version = "1.4.3"
+version = "1.5.0"
 description = "Utilities for writing pandoc filters in python"
 category = "main"
 optional = true
@@ -688,7 +750,7 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 
 [[package]]
 name = "parso"
-version = "0.8.2"
+version = "0.8.3"
 description = "A Python Parser"
 category = "main"
 optional = true
@@ -700,11 +762,11 @@ testing = ["docopt", "pytest (<6.0.0)"]
 
 [[package]]
 name = "pathspec"
-version = "0.8.1"
+version = "0.10.1"
 description = "Utility library for gitignore style pattern matching of file paths."
 category = "dev"
 optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
+python-versions = ">=3.7"
 
 [[package]]
 name = "pexpect"
@@ -725,27 +787,48 @@ category = "main"
 optional = true
 python-versions = "*"
 
+[[package]]
+name = "pkgutil-resolve-name"
+version = "1.3.10"
+description = "Resolve a name to an object."
+category = "main"
+optional = true
+python-versions = ">=3.6"
+
+[[package]]
+name = "platformdirs"
+version = "2.5.2"
+description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"."
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+
+[package.extras]
+docs = ["furo (>=2021.7.5b38)", "proselint (>=0.10.2)", "sphinx-autodoc-typehints (>=1.12)", "sphinx (>=4)"]
+test = ["appdirs (==1.4.4)", "pytest-cov (>=2.7)", "pytest-mock (>=3.6)", "pytest (>=6)"]
+
 [[package]]
 name = "pluggy"
-version = "0.13.1"
+version = "1.0.0"
 description = "plugin and hook calling mechanisms for python"
 category = "dev"
 optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
+python-versions = ">=3.6"
 
 [package.dependencies]
 importlib-metadata = {version = ">=0.12", markers = "python_version < \"3.8\""}
 
 [package.extras]
 dev = ["pre-commit", "tox"]
+testing = ["pytest", "pytest-benchmark"]
 
 [[package]]
 name = "prompt-toolkit"
-version = "3.0.19"
+version = "3.0.31"
 description = "Library for building powerful interactive command lines in Python"
 category = "main"
 optional = true
-python-versions = ">=3.6.1"
+python-versions = ">=3.6.2"
 
 [package.dependencies]
 wcwidth = "*"
@@ -760,11 +843,11 @@ python-versions = "*"
 
 [[package]]
 name = "py"
-version = "1.10.0"
+version = "1.11.0"
 description = "library with cross-python path, ini-parsing, io, code, log facilities"
 category = "main"
 optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
+python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 
 [[package]]
 name = "pycodestyle"
@@ -776,7 +859,7 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 
 [[package]]
 name = "pycparser"
-version = "2.20"
+version = "2.21"
 description = "C parser in Python"
 category = "main"
 optional = false
@@ -784,14 +867,14 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 
 [[package]]
 name = "pydantic"
-version = "1.8.2"
-description = "Data validation and settings management using python 3.6 type hinting"
+version = "1.10.2"
+description = "Data validation and settings management using python type hints"
 category = "main"
 optional = false
-python-versions = ">=3.6.1"
+python-versions = ">=3.7"
 
 [package.dependencies]
-typing-extensions = ">=3.7.4.3"
+typing-extensions = ">=4.1.0"
 
 [package.extras]
 dotenv = ["python-dotenv (>=0.10.4)"]
@@ -807,45 +890,51 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 
 [[package]]
 name = "pygments"
-version = "2.9.0"
+version = "2.13.0"
 description = "Pygments is a syntax highlighting package written in Python."
 category = "main"
 optional = true
-python-versions = ">=3.5"
+python-versions = ">=3.6"
+
+[package.extras]
+plugins = ["importlib-metadata"]
 
 [[package]]
 name = "pyjwt"
-version = "2.4.0"
+version = "2.5.0"
 description = "JSON Web Token implementation in Python"
 category = "main"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
 
 [package.extras]
-crypto = ["cryptography (>=3.3.1)"]
-dev = ["sphinx", "sphinx-rtd-theme", "zope.interface", "cryptography (>=3.3.1)", "pytest (>=6.0.0,<7.0.0)", "coverage[toml] (==5.0.4)", "mypy", "pre-commit"]
-docs = ["sphinx", "sphinx-rtd-theme", "zope.interface"]
+crypto = ["cryptography (>=3.3.1)", "types-cryptography (>=3.3.21)"]
+dev = ["sphinx (>=4.5.0,<5.0.0)", "sphinx-rtd-theme", "zope.interface", "cryptography (>=3.3.1)", "types-cryptography (>=3.3.21)", "pytest (>=6.0.0,<7.0.0)", "coverage[toml] (==5.0.4)", "pre-commit"]
+docs = ["sphinx (>=4.5.0,<5.0.0)", "sphinx-rtd-theme", "zope.interface"]
 tests = ["pytest (>=6.0.0,<7.0.0)", "coverage[toml] (==5.0.4)"]
 
 [[package]]
 name = "pyparsing"
-version = "2.4.7"
-description = "Python parsing module"
+version = "3.0.9"
+description = "pyparsing module - Classes and methods to define and execute parsing grammars"
 category = "main"
 optional = false
-python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*"
+python-versions = ">=3.6.8"
+
+[package.extras]
+diagrams = ["railroad-diagrams", "jinja2"]
 
 [[package]]
 name = "pyrsistent"
-version = "0.17.3"
+version = "0.18.1"
 description = "Persistent/Functional/Immutable data structures"
 category = "main"
 optional = true
-python-versions = ">=3.5"
+python-versions = ">=3.7"
 
 [[package]]
 name = "pytest"
-version = "6.2.4"
+version = "6.2.5"
 description = "pytest: simple powerful testing with Python"
 category = "dev"
 optional = false
@@ -858,7 +947,7 @@ colorama = {version = "*", markers = "sys_platform == \"win32\""}
 importlib-metadata = {version = ">=0.12", markers = "python_version < \"3.8\""}
 iniconfig = "*"
 packaging = "*"
-pluggy = ">=0.12,<1.0.0a1"
+pluggy = ">=0.12,<2.0"
 py = ">=1.8.2"
 toml = "*"
 
@@ -883,11 +972,11 @@ testing = ["fields", "hunter", "process-tests", "six", "pytest-xdist", "virtuale
 
 [[package]]
 name = "pytest-forked"
-version = "1.3.0"
+version = "1.4.0"
 description = "run tests in isolated forked subprocesses"
 category = "dev"
 optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
+python-versions = ">=3.6"
 
 [package.dependencies]
 py = "*"
@@ -907,11 +996,11 @@ pytest = ">=3.0.0"
 
 [[package]]
 name = "pytest-mock"
-version = "3.6.1"
+version = "3.9.0"
 description = "Thin-wrapper around the mock package for easier use with pytest"
 category = "dev"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
 
 [package.dependencies]
 pytest = ">=5.0"
@@ -943,7 +1032,7 @@ pytest = ">=3.6.0"
 
 [[package]]
 name = "pytest-xdist"
-version = "2.3.0"
+version = "2.5.0"
 description = "pytest xdist plugin for distributed testing and loop-on-failing modes"
 category = "dev"
 optional = false
@@ -951,16 +1040,17 @@ python-versions = ">=3.6"
 
 [package.dependencies]
 execnet = ">=1.1"
-pytest = ">=6.0.0"
+pytest = ">=6.2.0"
 pytest-forked = "*"
 
 [package.extras]
 psutil = ["psutil (>=3.0)"]
+setproctitle = ["setproctitle"]
 testing = ["filelock"]
 
 [[package]]
 name = "python-dateutil"
-version = "2.8.1"
+version = "2.8.2"
 description = "Extensions to the standard Python datetime module"
 category = "main"
 optional = false
@@ -971,7 +1061,7 @@ six = ">=1.5"
 
 [[package]]
 name = "python-rapidjson"
-version = "1.0"
+version = "1.8"
 description = "Python wrapper around rapidjson"
 category = "main"
 optional = false
@@ -979,7 +1069,7 @@ python-versions = ">=3.6"
 
 [[package]]
 name = "pytz"
-version = "2021.1"
+version = "2022.2.1"
 description = "World timezone definitions, modern and historical"
 category = "main"
 optional = true
@@ -987,7 +1077,7 @@ python-versions = "*"
 
 [[package]]
 name = "pywin32"
-version = "301"
+version = "304"
 description = "Python for Window Extensions"
 category = "main"
 optional = true
@@ -995,7 +1085,7 @@ python-versions = "*"
 
 [[package]]
 name = "pyzmq"
-version = "22.1.0"
+version = "24.0.1"
 description = "Python bindings for 0MQ"
 category = "main"
 optional = false
@@ -1007,7 +1097,7 @@ py = {version = "*", markers = "implementation_name == \"pypy\""}
 
 [[package]]
 name = "qcs-api-client"
-version = "0.21.0"
+version = "0.21.2"
 description = "A client library for accessing the Rigetti QCS API"
 category = "main"
 optional = false
@@ -1015,7 +1105,7 @@ python-versions = ">=3.7,<4.0"
 
 [package.dependencies]
 attrs = ">=20.1.0,<21.0.0"
-httpx = ">=0.15.0,<0.16.0"
+httpx = ">=0.23.0,<0.24.0"
 iso8601 = ">=1.0.2,<2.0.0"
 pydantic = ">=1.7.2,<2.0.0"
 PyJWT = ">=2.4.0,<3.0.0"
@@ -1037,42 +1127,34 @@ commonmark = ">=0.8.1"
 docutils = ">=0.11"
 sphinx = ">=1.3.1"
 
-[[package]]
-name = "regex"
-version = "2021.4.4"
-description = "Alternative regular expression module, to replace re."
-category = "dev"
-optional = false
-python-versions = "*"
-
 [[package]]
 name = "requests"
-version = "2.25.1"
+version = "2.28.1"
 description = "Python HTTP for Humans."
 category = "main"
 optional = true
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
+python-versions = ">=3.7, <4"
 
 [package.dependencies]
 certifi = ">=2017.4.17"
-chardet = ">=3.0.2,<5"
-idna = ">=2.5,<3"
+charset-normalizer = ">=2,<3"
+idna = ">=2.5,<4"
 urllib3 = ">=1.21.1,<1.27"
 
 [package.extras]
-security = ["pyOpenSSL (>=0.14)", "cryptography (>=1.3.4)"]
-socks = ["PySocks (>=1.5.6,!=1.5.7)", "win-inet-pton"]
+use_chardet_on_py3 = ["chardet (>=3.0.2,<6)"]
+socks = ["PySocks (>=1.5.6,!=1.5.7)"]
 
 [[package]]
 name = "respx"
-version = "0.15.1"
+version = "0.20.0"
 description = "A utility for mocking out the Python HTTPX and HTTP Core libraries."
 category = "dev"
 optional = false
 python-versions = ">=3.6"
 
 [package.dependencies]
-httpx = ">=0.15"
+httpx = ">=0.21.0"
 
 [[package]]
 name = "retry"
@@ -1135,14 +1217,14 @@ pyzmq = ">=17"
 
 [[package]]
 name = "ruamel.yaml"
-version = "0.17.9"
+version = "0.17.21"
 description = "ruamel.yaml is a YAML parser/emitter that supports roundtrip preservation of comments, seq/map flow style, and map key order"
 category = "main"
 optional = false
 python-versions = ">=3"
 
 [package.dependencies]
-"ruamel.yaml.clib" = {version = ">=0.1.2", markers = "platform_python_implementation == \"CPython\" and python_version < \"3.10\""}
+"ruamel.yaml.clib" = {version = ">=0.2.6", markers = "platform_python_implementation == \"CPython\" and python_version < \"3.11\""}
 
 [package.extras]
 docs = ["ryd"]
@@ -1150,11 +1232,11 @@ jinja2 = ["ruamel.yaml.jinja2 (>=0.2)"]
 
 [[package]]
 name = "ruamel.yaml.clib"
-version = "0.2.2"
+version = "0.2.6"
 description = "C version of reader, parser and emitter for ruamel.yaml derived from libyaml"
 category = "main"
 optional = false
-python-versions = "*"
+python-versions = ">=3.5"
 
 [[package]]
 name = "scipy"
@@ -1177,23 +1259,31 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*"
 
 [[package]]
 name = "sniffio"
-version = "1.2.0"
+version = "1.3.0"
 description = "Sniff out which async library your code is running under"
 category = "main"
 optional = false
-python-versions = ">=3.5"
+python-versions = ">=3.7"
 
 [[package]]
 name = "snowballstemmer"
-version = "2.1.0"
+version = "2.2.0"
 description = "This package provides 29 stemmers for 28 languages generated from Snowball algorithms."
 category = "main"
 optional = true
 python-versions = "*"
 
+[[package]]
+name = "soupsieve"
+version = "2.3.2.post1"
+description = "A modern CSS selector implementation for Beautiful Soup."
+category = "main"
+optional = true
+python-versions = ">=3.6"
+
 [[package]]
 name = "sphinx"
-version = "4.0.2"
+version = "4.5.0"
 description = "Python documentation generator"
 category = "main"
 optional = true
@@ -1205,6 +1295,7 @@ babel = ">=1.3"
 colorama = {version = ">=0.3.5", markers = "sys_platform == \"win32\""}
 docutils = ">=0.14,<0.18"
 imagesize = "*"
+importlib-metadata = {version = ">=4.4", markers = "python_version < \"3.10\""}
 Jinja2 = ">=2.3"
 packaging = "*"
 Pygments = ">=2.0"
@@ -1212,14 +1303,14 @@ requests = ">=2.5.0"
 snowballstemmer = ">=1.1"
 sphinxcontrib-applehelp = "*"
 sphinxcontrib-devhelp = "*"
-sphinxcontrib-htmlhelp = "*"
+sphinxcontrib-htmlhelp = ">=2.0.0"
 sphinxcontrib-jsmath = "*"
 sphinxcontrib-qthelp = "*"
-sphinxcontrib-serializinghtml = "*"
+sphinxcontrib-serializinghtml = ">=1.1.5"
 
 [package.extras]
 docs = ["sphinxcontrib-websupport"]
-lint = ["flake8 (>=3.5.0)", "isort", "mypy (>=0.800)", "docutils-stubs"]
+lint = ["flake8 (>=3.5.0)", "isort", "mypy (>=0.931)", "docutils-stubs", "types-typed-ast", "types-requests"]
 test = ["pytest", "pytest-cov", "html5lib", "cython", "typed-ast"]
 
 [[package]]
@@ -1235,7 +1326,7 @@ docutils = "<0.17"
 sphinx = "*"
 
 [package.extras]
-dev = ["transifex-client", "sphinxcontrib-httpdomain", "bump2version"]
+dev = ["bump2version", "sphinxcontrib-httpdomain", "transifex-client"]
 
 [[package]]
 name = "sphinxcontrib-applehelp"
@@ -1246,8 +1337,8 @@ optional = true
 python-versions = ">=3.5"
 
 [package.extras]
-lint = ["flake8", "mypy", "docutils-stubs"]
 test = ["pytest"]
+lint = ["docutils-stubs", "mypy", "flake8"]
 
 [[package]]
 name = "sphinxcontrib-devhelp"
@@ -1258,8 +1349,8 @@ optional = true
 python-versions = ">=3.5"
 
 [package.extras]
-lint = ["flake8", "mypy", "docutils-stubs"]
 test = ["pytest"]
+lint = ["docutils-stubs", "mypy", "flake8"]
 
 [[package]]
 name = "sphinxcontrib-htmlhelp"
@@ -1270,8 +1361,8 @@ optional = true
 python-versions = ">=3.6"
 
 [package.extras]
-lint = ["flake8", "mypy", "docutils-stubs"]
-test = ["pytest", "html5lib"]
+test = ["html5lib", "pytest"]
+lint = ["docutils-stubs", "mypy", "flake8"]
 
 [[package]]
 name = "sphinxcontrib-jsmath"
@@ -1282,7 +1373,7 @@ optional = true
 python-versions = ">=3.5"
 
 [package.extras]
-test = ["pytest", "flake8", "mypy"]
+test = ["mypy", "flake8", "pytest"]
 
 [[package]]
 name = "sphinxcontrib-qthelp"
@@ -1293,8 +1384,8 @@ optional = true
 python-versions = ">=3.5"
 
 [package.extras]
-lint = ["flake8", "mypy", "docutils-stubs"]
 test = ["pytest"]
+lint = ["docutils-stubs", "mypy", "flake8"]
 
 [[package]]
 name = "sphinxcontrib-serializinghtml"
@@ -1309,15 +1400,19 @@ lint = ["flake8", "mypy", "docutils-stubs"]
 test = ["pytest"]
 
 [[package]]
-name = "testpath"
-version = "0.5.0"
-description = "Test utilities for code working with files and commands"
+name = "tinycss2"
+version = "1.1.1"
+description = "A tiny CSS parser"
 category = "main"
 optional = true
-python-versions = ">= 3.5"
+python-versions = ">=3.6"
+
+[package.dependencies]
+webencodings = ">=0.4"
 
 [package.extras]
-test = ["pytest", "pathlib2"]
+test = ["coverage", "pytest-isort", "pytest-flake8", "pytest-cov", "pytest"]
+doc = ["sphinx-rtd-theme", "sphinx"]
 
 [[package]]
 name = "toml"
@@ -1327,55 +1422,76 @@ category = "main"
 optional = false
 python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*"
 
+[[package]]
+name = "tomli"
+version = "2.0.1"
+description = "A lil' TOML parser"
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+
 [[package]]
 name = "tornado"
-version = "6.1"
+version = "6.2"
 description = "Tornado is a Python web framework and asynchronous networking library, originally developed at FriendFeed."
 category = "main"
 optional = true
-python-versions = ">= 3.5"
+python-versions = ">= 3.7"
 
 [[package]]
 name = "traitlets"
-version = "5.0.5"
-description = "Traitlets Python configuration system"
+version = "5.4.0"
+description = ""
 category = "main"
 optional = true
 python-versions = ">=3.7"
 
-[package.dependencies]
-ipython-genutils = "*"
-
 [package.extras]
-test = ["pytest"]
+test = ["pre-commit", "pytest"]
 
 [[package]]
 name = "typed-ast"
-version = "1.4.3"
+version = "1.5.4"
 description = "a fork of Python 2 and 3 ast modules with type comment support"
 category = "dev"
 optional = false
+python-versions = ">=3.6"
+
+[[package]]
+name = "types-python-dateutil"
+version = "2.8.19"
+description = "Typing stubs for python-dateutil"
+category = "main"
+optional = false
 python-versions = "*"
 
 [[package]]
-name = "typing-extensions"
-version = "3.10.0.0"
-description = "Backported and Experimental Type Hints for Python 3.5+"
+name = "types-retry"
+version = "0.9.9"
+description = "Typing stubs for retry"
 category = "main"
 optional = false
 python-versions = "*"
 
+[[package]]
+name = "typing-extensions"
+version = "4.3.0"
+description = "Backported and Experimental Type Hints for Python 3.7+"
+category = "main"
+optional = false
+python-versions = ">=3.7"
+
 [[package]]
 name = "urllib3"
-version = "1.26.5"
+version = "1.26.12"
 description = "HTTP library with thread-safe connection pooling, file post, and more."
 category = "main"
 optional = true
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, <4"
+python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*, <4"
 
 [package.extras]
-brotli = ["brotlipy (>=0.6.0)"]
-secure = ["pyOpenSSL (>=0.14)", "cryptography (>=1.3.4)", "idna (>=2.0.0)", "certifi", "ipaddress"]
+brotli = ["brotlicffi (>=0.8.0)", "brotli (>=1.0.9)", "brotlipy (>=0.6.0)"]
+secure = ["pyOpenSSL (>=0.14)", "cryptography (>=1.3.4)", "idna (>=2.0.0)", "certifi", "urllib3-secure-extra", "ipaddress"]
 socks = ["PySocks (>=1.5.6,!=1.5.7,<2.0)"]
 
 [[package]]
@@ -1396,15 +1512,15 @@ python-versions = "*"
 
 [[package]]
 name = "zipp"
-version = "3.4.1"
+version = "3.8.1"
 description = "Backport of pathlib-compatible object wrapper for zip files"
 category = "main"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
 
 [package.extras]
-docs = ["sphinx", "jaraco.packaging (>=8.2)", "rst.linker (>=1.9)"]
-testing = ["pytest (>=4.6)", "pytest-checkdocs (>=1.2.3)", "pytest-flake8", "pytest-cov", "pytest-enabler", "jaraco.itertools", "func-timeout", "pytest-black (>=0.3.7)", "pytest-mypy"]
+docs = ["sphinx", "jaraco.packaging (>=9)", "rst.linker (>=1.9)", "jaraco.tidelift (>=1.4)"]
+testing = ["pytest (>=6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-cov", "pytest-enabler (>=1.3)", "jaraco.itertools", "func-timeout", "pytest-black (>=0.3.7)", "pytest-mypy (>=0.9.1)"]
 
 [extras]
 docs = ["Sphinx", "sphinx-rtd-theme", "nbsphinx", "recommonmark"]
@@ -1413,316 +1529,126 @@ latex = ["ipython"]
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+]
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+traitlets = []
+typed-ast = []
+types-python-dateutil = []
+types-retry = []
+typing-extensions = []
+urllib3 = []
+wcwidth = []
+webencodings = []
+zipp = []
diff --git a/pyproject.toml b/pyproject.toml
index a9e011926..6d7a05c75 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -8,28 +8,28 @@ repository = "https://github.com/rigetti/pyquil.git"
 documentation = "https://pyquil-docs.rigetti.com"
 license = "Apache-2.0"
 classifiers = [
-    "Development Status :: 5 - Production/Stable",
-    "License :: OSI Approved :: Apache Software License",
-    "Programming Language :: Python :: 3.7",
-    "Programming Language :: Python :: 3.8",
-    "Programming Language :: Python :: 3.9",
-    "Operating System :: OS Independent",
+  "Development Status :: 5 - Production/Stable",
+  "License :: OSI Approved :: Apache Software License",
+  "Programming Language :: Python :: 3.7",
+  "Programming Language :: Python :: 3.8",
+  "Programming Language :: Python :: 3.9",
+  "Operating System :: OS Independent",
 ]
 keywords = ["quantum", "quil", "programming", "hybrid"]
-packages = [
-    { include = "pyquil" }
-]
+packages = [{ include = "pyquil" }]
 
 [tool.poetry.dependencies]
 python = "^3.7"
-numpy = "^1.20"
+numpy = "^1.21"
 scipy = "^1.6.1"
 lark = "^0.11.1"
 rpcq = "^3.10.0"
 networkx = "^2.5"
 importlib-metadata = { version = ">=3.7.3,<5", python = "<3.8" }
-qcs-api-client = ">=0.20.13,<0.22.0"
+qcs-api-client = ">=0.21.0,<0.22.0"
 retry = "^0.9.2"
+types-python-dateutil = "^2.8.19"
+types-retry = "^0.9.9"
 
 # latex extra
 ipython = { version = "^7.21.0", optional = true }
@@ -41,17 +41,17 @@ nbsphinx = { version = "^0.8.6", optional = true }
 recommonmark = { version = "^0.7.1", optional = true }
 
 [tool.poetry.dev-dependencies]
-black = "^20.8b1"
+black = "^22.8.0"
 flake8 = "^3.8.1"
 pytest = "^6.2.2"
 pytest-cov = "^2.11.1"
-mypy = "0.740"
+mypy = "0.981"
 pytest-xdist = "^2.2.1"
 pytest-rerunfailures = "^9.1.1"
 pytest-timeout = "^1.4.2"
 pytest-mock = "^3.6.1"
 pytest-freezegun = "^0.4.2"
-respx = "^0.15"
+respx = "^0.20"
 
 [tool.poetry.extras]
 latex = ["ipython"]
diff --git a/pyquil/api/_benchmark.py b/pyquil/api/_benchmark.py
index f9a5ad42d..79721c481 100644
--- a/pyquil/api/_benchmark.py
+++ b/pyquil/api/_benchmark.py
@@ -74,7 +74,7 @@ def apply_clifford_to_pauli(self, clifford: Program, pauli_in: PauliTerm) -> Pau
 
         phase_factor, paulis = response.phase_factor, response.pauli
 
-        pauli_out = PauliTerm("I", 0, 1.0j ** phase_factor)
+        pauli_out = PauliTerm("I", 0, 1.0j**phase_factor)
         clifford_qubits = clifford.get_qubits()
         pauli_qubits = pauli_in.get_qubits()
         all_qubits = sorted(set(cast(List[int], pauli_qubits)).union(set(cast(List[int], clifford_qubits))))
@@ -123,7 +123,7 @@ def generate_rb_sequence(
 
         # Support QubitPlaceholders: we temporarily index to arbitrary integers.
         # `generate_rb_sequence` handles mapping back to the original gateset gates.
-        gateset_as_program = address_qubits(sum(gateset, Program()))
+        gateset_as_program = address_qubits(sum(gateset, Program()))  # type: ignore
         qubits = len(gateset_as_program.get_qubits())
         gateset_for_api = gateset_as_program.out().splitlines()
         interleaver_out: Optional[str] = None
diff --git a/pyquil/api/_compiler.py b/pyquil/api/_compiler.py
index eeffbceaa..6678bfc4f 100644
--- a/pyquil/api/_compiler.py
+++ b/pyquil/api/_compiler.py
@@ -47,7 +47,7 @@ class QPUCompilerNotRunning(Exception):
 
 
 def parse_mref(val: str) -> MemoryReference:
-    """ Parse a memory reference from its string representation. """
+    """Parse a memory reference from its string representation."""
     val = val.strip()
     try:
         if val[-1] == "]":
diff --git a/pyquil/api/_qpu.py b/pyquil/api/_qpu.py
index 2efb31142..ba22e14a8 100644
--- a/pyquil/api/_qpu.py
+++ b/pyquil/api/_qpu.py
@@ -43,7 +43,7 @@ def decode_buffer(buffer: BufferResponse) -> np.ndarray:
     :param buffer: Dictionary with 'data' byte array, 'dtype', and 'shape' fields
     :return: NumPy array of decoded data
     """
-    buf = np.frombuffer(buffer.data, dtype=buffer.dtype)
+    buf = np.frombuffer(buffer.data, dtype=buffer.dtype)  # type: ignore
     return buf.reshape(buffer.shape)  # type: ignore
 
 
@@ -83,8 +83,8 @@ def alloc(spec: ParameterSpec) -> np.ndarray:
         if buf.ndim == 1:
             buf = buf.reshape((num_shots, 1))
 
-        if np.iscomplexobj(buf):
-            buf = np.column_stack((buf.real, buf.imag))
+        if np.iscomplexobj(buf):  # type: ignore
+            buf = np.column_stack((buf.real, buf.imag))  # type: ignore
         _, width = buf.shape
 
         end = mref.offset + width
diff --git a/pyquil/api/_qpu_client.py b/pyquil/api/_qpu_client.py
index 1ca0df6c3..3998bf153 100644
--- a/pyquil/api/_qpu_client.py
+++ b/pyquil/api/_qpu_client.py
@@ -181,7 +181,7 @@ def get_execution_results(self, request: GetBuffersRequest) -> GetBuffersRespons
             execution_duration_microseconds=result.execution_duration_microseconds,
         )
 
-    @retry(exceptions=TimeoutError, tries=2)  # type: ignore
+    @retry(exceptions=TimeoutError, tries=2)
     def _rpcq_request(self, method_name: str, *args: Any, **kwargs: Any) -> Any:
         engagement = self._engagement_manager.get_engagement(
             endpoint_id=self._endpoint_id,
diff --git a/pyquil/api/_quantum_computer.py b/pyquil/api/_quantum_computer.py
index 1c30c1b53..ee61e9604 100644
--- a/pyquil/api/_quantum_computer.py
+++ b/pyquil/api/_quantum_computer.py
@@ -240,7 +240,7 @@ def run_experiment(
                     bitmask = np.array(np.array(final_memory_map["symmetrization"]) / np.pi, dtype=int)
                     bitstrings = np.bitwise_xor(bitstrings, bitmask)
                 all_bitstrings.append(bitstrings)
-            symmetrized_bitstrings = np.concatenate(all_bitstrings)
+            symmetrized_bitstrings = np.concatenate(all_bitstrings)  # type: ignore
 
             joint_expectations = [experiment.get_meas_registers(qubits)]
             if setting.additional_expectations:
@@ -906,7 +906,7 @@ def local_forest_runtime(
     qvm_port: int = 5000,
     quilc_port: int = 5555,
     use_protoquil: bool = False,
-) -> Iterator[Tuple[Optional[subprocess.Popen], Optional[subprocess.Popen]]]:  # type: ignore
+) -> Iterator[Tuple[Optional[subprocess.Popen], Optional[subprocess.Popen]]]:
     """A context manager for local QVM and QUIL compiler.
 
     You must first have installed the `qvm` and `quilc` executables from
@@ -949,8 +949,8 @@ def local_forest_runtime(
         value in the tuple will be ``None``.
     """
 
-    qvm: Optional[subprocess.Popen] = None  # type: ignore
-    quilc: Optional[subprocess.Popen] = None  # type: ignore
+    qvm: Optional[subprocess.Popen] = None
+    quilc: Optional[subprocess.Popen] = None
 
     # If the host we should listen to is 0.0.0.0, we replace it
     # with 127.0.0.1 to use a valid IP when checking if the port is in use.
@@ -1146,7 +1146,7 @@ def _construct_orthogonal_array(num_qubits: int, strength: int = 3) -> np.ndarra
         # `construct_strength_two_orthogonal_array` docstrings, for more details.
         zero_array = np.zeros((1, num_qubits))
         one_array = np.ones((1, num_qubits))
-        flip_matrix = np.concatenate((zero_array, one_array), axis=0).astype(int)
+        flip_matrix = np.concatenate((zero_array, one_array), axis=0).astype(int)  # type: ignore
     elif strength == 2:
         flip_matrix = _construct_strength_two_orthogonal_array(num_qubits)
     elif strength == 3:
@@ -1198,7 +1198,7 @@ def hadamard(n: int, dtype: np.dtype = int) -> np.ndarray:  # type: ignore
         lg2 = 0
     else:
         lg2 = int(log(n, 2))
-    if 2 ** lg2 != n:
+    if 2**lg2 != n:
         raise ValueError("n must be an positive integer, and n must be a power of 2")
 
     H = np.array([[1]], dtype=dtype)
@@ -1235,7 +1235,7 @@ def _construct_strength_three_orthogonal_array(num_qubits: int) -> np.ndarray:
     """
     num_qubits_power_of_2 = _next_power_of_2(num_qubits)
     H = hadamard(num_qubits_power_of_2)
-    Hfold = np.concatenate((H, -H), axis=0)
+    Hfold = np.concatenate((H, -H), axis=0)  # type: ignore
     orthogonal_array: np.ndarray = ((Hfold + 1) / 2).astype(int)
     return orthogonal_array
 
@@ -1288,7 +1288,7 @@ def _check_min_num_trials_for_symmetrized_readout(num_qubits: int, trials: int,
         raise ValueError("symm_type must be one of the following ints [-1, 0, 1, 2, 3].")
 
     if symm_type == -1:
-        min_num_trials = 2 ** num_qubits
+        min_num_trials = 2**num_qubits
     elif symm_type == 2:
 
         def _f(x: int) -> int:
diff --git a/pyquil/api/_qvm.py b/pyquil/api/_qvm.py
index 1e237bb4e..f7297b0bd 100644
--- a/pyquil/api/_qvm.py
+++ b/pyquil/api/_qvm.py
@@ -131,7 +131,7 @@ def execute(self, executable: QuantumExecutable) -> QVMExecuteResponse:
         if not isinstance(executable, Program):
             raise TypeError(f"`QVM#executable` argument must be a `Program`; got {type(executable)}")
 
-        result_memory = {}
+        result_memory: dict = {}
 
         for region in executable.declarations.keys():
             result_memory[region] = np.ndarray((executable.num_shots, 0), dtype=np.int64)
diff --git a/pyquil/api/_rewrite_arithmetic.py b/pyquil/api/_rewrite_arithmetic.py
index ae8da3fdf..fc674dc1f 100644
--- a/pyquil/api/_rewrite_arithmetic.py
+++ b/pyquil/api/_rewrite_arithmetic.py
@@ -79,7 +79,7 @@ def aref(ref: MemoryReference) -> ParameterAref:
     mref_idx = 0
 
     def expr_mref(expr: object) -> MemoryReference:
-        """ Get a suitable MemoryReference for a given expression. """
+        """Get a suitable MemoryReference for a given expression."""
         nonlocal mref_idx
         expr = str(expr)
         if expr in seen_exprs:
diff --git a/pyquil/compatibility/v2/api/_quantum_computer.py b/pyquil/compatibility/v2/api/_quantum_computer.py
index 7d694966f..5252ff9aa 100644
--- a/pyquil/compatibility/v2/api/_quantum_computer.py
+++ b/pyquil/compatibility/v2/api/_quantum_computer.py
@@ -195,7 +195,7 @@ def experiment(
                     bitmask = np.array(np.array(final_memory_map["symmetrization"]) / np.pi, dtype=int)
                     bitstrings = np.bitwise_xor(bitstrings, bitmask)
                 all_bitstrings.append(bitstrings)
-            symmetrized_bitstrings = np.concatenate(all_bitstrings)
+            symmetrized_bitstrings = np.concatenate(all_bitstrings)  # type: ignore
 
             joint_expectations = [experiment.get_meas_registers(qubits)]
             if setting.additional_expectations:
@@ -615,7 +615,7 @@ def _construct_orthogonal_array(num_qubits: int, strength: int = 3) -> np.ndarra
         # `construct_strength_two_orthogonal_array` docstrings, for more details.
         zero_array = np.zeros((1, num_qubits))
         one_array = np.ones((1, num_qubits))
-        flip_matrix = np.concatenate((zero_array, one_array), axis=0).astype(int)
+        flip_matrix = np.concatenate((zero_array, one_array), axis=0).astype(int)  # type: ignore
     elif strength == 2:
         flip_matrix = _construct_strength_two_orthogonal_array(num_qubits)
     elif strength == 3:
@@ -667,7 +667,7 @@ def hadamard(n: int, dtype: np.dtype = int) -> np.ndarray:  # type: ignore
         lg2 = 0
     else:
         lg2 = int(log(n, 2))
-    if 2 ** lg2 != n:
+    if 2**lg2 != n:
         raise ValueError("n must be an positive integer, and n must be a power of 2")
 
     H = np.array([[1]], dtype=dtype)
@@ -704,7 +704,7 @@ def _construct_strength_three_orthogonal_array(num_qubits: int) -> np.ndarray:
     """
     num_qubits_power_of_2 = _next_power_of_2(num_qubits)
     H = hadamard(num_qubits_power_of_2)
-    Hfold = np.concatenate((H, -H), axis=0)
+    Hfold = np.concatenate((H, -H), axis=0)  # type: ignore
     orthogonal_array = cast(np.ndarray, ((Hfold + 1) / 2).astype(int))
     return orthogonal_array
 
@@ -757,7 +757,7 @@ def _check_min_num_trials_for_symmetrized_readout(num_qubits: int, trials: int,
         raise ValueError("symm_type must be one of the following ints [-1, 0, 1, 2, 3].")
 
     if symm_type == -1:
-        min_num_trials = 2 ** num_qubits
+        min_num_trials = 2**num_qubits
     elif symm_type == 2:
 
         def _f(x: int) -> int:
diff --git a/pyquil/experiment/_result.py b/pyquil/experiment/_result.py
index 243236fd8..ce769d64a 100644
--- a/pyquil/experiment/_result.py
+++ b/pyquil/experiment/_result.py
@@ -145,7 +145,7 @@ def correct_experiment_result(
     # combine standard errors (are we assuming the counts are the same?)
     assert result.std_err is not None and calibration.std_err is not None
     corrected_variance = ratio_variance(
-        result.expectation, result.std_err ** 2, calibration.expectation, calibration.std_err ** 2  # type: ignore
+        result.expectation, result.std_err**2, calibration.expectation, calibration.std_err**2  # type: ignore
     )
 
     # recursively apply to additional results
@@ -204,4 +204,4 @@ def ratio_variance(
     :param b: Mean of 'B', to be used as the numerator in a ratio.
     :param var_b: Variance in 'B'
     """
-    return var_a / b ** 2 + (a ** 2 * var_b) / b ** 4
+    return var_a / b**2 + (a**2 * var_b) / b**4
diff --git a/pyquil/noise.py b/pyquil/noise.py
index 15b33ea58..5521214e4 100644
--- a/pyquil/noise.py
+++ b/pyquil/noise.py
@@ -30,7 +30,7 @@
 
 if TYPE_CHECKING:
     from pyquil.quil import Program
-    from pyquil.api import QuantumComputer
+    from pyquil.api import QuantumComputer as PyquilApiQuantumComputer
 
 INFINITY = float("inf")
 "Used for infinite coherence times."
@@ -188,11 +188,11 @@ def _check_kraus_ops(n: int, kraus_ops: Sequence[np.ndarray]) -> None:
     :param kraus_ops: The Kraus operators as numpy.ndarrays.
     """
     for k in kraus_ops:
-        if not np.shape(k) == (2 ** n, 2 ** n):
-            raise ValueError("Kraus operators for {0} qubits must have shape {1}x{1}: {2}".format(n, 2 ** n, k))
+        if not np.shape(k) == (2**n, 2**n):
+            raise ValueError("Kraus operators for {0} qubits must have shape {1}x{1}: {2}".format(n, 2**n, k))
 
     kdk_sum = sum(np.transpose(k).conjugate().dot(k) for k in kraus_ops)
-    if not np.allclose(kdk_sum, np.eye(2 ** n), atol=1e-3):
+    if not np.allclose(kdk_sum, np.eye(2**n), atol=1e-3):
         raise ValueError("Kraus operator not correctly normalized: sum_j K_j^*K_j == {}".format(kdk_sum))
 
 
@@ -219,7 +219,7 @@ def _create_kraus_pragmas(name: str, qubit_indices: Sequence[int], kraus_ops: Se
 
 def append_kraus_to_gate(
     kraus_ops: Sequence[np.ndarray], gate_matrix: np.ndarray
-) -> List[Union[np.number, np.ndarray]]:  # type: ignore
+) -> List[Union[np.number, np.ndarray]]:
     """
     Follow a gate ``gate_matrix`` by a Kraus map described by ``kraus_ops``.
 
@@ -265,7 +265,7 @@ def pauli_kraus_map(probabilities: Sequence[float]) -> List[np.ndarray]:
     if len(probabilities) == 4:
         operators = paulis
     else:
-        operators = np.kron(paulis, paulis)
+        operators = np.kron(paulis, paulis)  # type: ignore
 
     return [coeff * op for coeff, op in zip(np.sqrt(probabilities), operators)]
 
@@ -281,7 +281,7 @@ def damping_kraus_map(p: float = 0.10) -> List[np.ndarray]:
     """
     damping_op = np.sqrt(p) * np.array([[0, 1], [0, 0]])
 
-    residual_kraus = np.diag([1, np.sqrt(1 - p)])
+    residual_kraus = np.diag([1, np.sqrt(1 - p)])  # type: ignore
     return [residual_kraus, damping_op]
 
 
@@ -293,7 +293,7 @@ def dephasing_kraus_map(p: float = 0.10) -> List[np.ndarray]:
     :return: A list [k1, k2] of the Kraus operators that parametrize the map.
     :rtype: list
     """
-    return [np.sqrt(1 - p) * np.eye(2), np.sqrt(p) * np.diag([1, -1])]
+    return [np.sqrt(1 - p) * np.eye(2), np.sqrt(p) * np.diag([1, -1])]  # type: ignore
 
 
 def tensor_kraus_maps(k1: List[np.ndarray], k2: List[np.ndarray]) -> List[np.ndarray]:
@@ -305,7 +305,7 @@ def tensor_kraus_maps(k1: List[np.ndarray], k2: List[np.ndarray]) -> List[np.nda
     :param k2: The Kraus operators for the second qubit.
     :return: A list of tensored Kraus operators.
     """
-    return [np.kron(k1j, k2l) for k1j in k1 for k2l in k2]
+    return [np.kron(k1j, k2l) for k1j in k1 for k2l in k2]  # type: ignore
 
 
 def combine_kraus_maps(k1: List[np.ndarray], k2: List[np.ndarray]) -> List[np.ndarray]:
@@ -318,7 +318,7 @@ def combine_kraus_maps(k1: List[np.ndarray], k2: List[np.ndarray]) -> List[np.nd
     :param k2: The list of Kraus operators that are applied first.
     :return: A combinatorially generated list of composed Kraus operators.
     """
-    return [np.dot(k1j, k2l) for k1j in k1 for k2l in k2]
+    return [np.dot(k1j, k2l) for k1j in k1 for k2l in k2]  # type: ignore
 
 
 def damping_after_dephasing(T1: float, T2: float, gate_time: float) -> List[np.ndarray]:
@@ -391,7 +391,7 @@ def get_noisy_gate(gate_name: str, params: Iterable[ParameterDesignator]) -> Tup
             return np.array([[0, 1j], [1j, 0]]), "NOISY-RX-MINUS-180"
     elif gate_name == "CZ":
         assert params == ()
-        return np.diag([1, 1, 1, -1]), "NOISY-CZ"
+        return np.diag([1, 1, 1, -1]), "NOISY-CZ"  # type: ignore
 
     raise NoisyGateUndefined(
         "Undefined gate and params: {}{}\n"
@@ -664,7 +664,7 @@ def estimate_bitstring_probs(results: np.ndarray) -> np.ndarray:
     """
     nshots, nq = np.shape(results)
     outcomes = np.array([int("".join(map(str, r)), 2) for r in results])
-    probs = np.histogram(outcomes, bins=np.arange(-0.5, 2 ** nq, 1))[0] / float(nshots)
+    probs = np.histogram(outcomes, bins=np.arange(-0.5, 2**nq, 1))[0] / float(nshots)  # type: ignore
     return _bitstring_probs_by_qubit(probs)
 
 
@@ -746,7 +746,7 @@ def correct_bitstring_probs(p: np.ndarray, assignment_probabilities: List[np.nda
         the noisy-readout-corrected estimated probabilities for each measured bitstring, i.e.,
         ``p[i,j,...,k]`` gives the estimated probability of bitstring ``ij...k``.
     """
-    return _apply_local_transforms(p, (np.linalg.inv(ap) for ap in assignment_probabilities))
+    return _apply_local_transforms(p, (np.linalg.inv(ap) for ap in assignment_probabilities))  # type: ignore
 
 
 def bitstring_probs_to_z_moments(p: np.ndarray) -> np.ndarray:
@@ -770,7 +770,7 @@ def bitstring_probs_to_z_moments(p: np.ndarray) -> np.ndarray:
 def estimate_assignment_probs(
     q: int,
     trials: int,
-    qc: "QuantumComputer",
+    qc: "PyquilApiQuantumComputer",
     p0: Optional["Program"] = None,
 ) -> np.ndarray:
     """
@@ -817,7 +817,7 @@ def estimate_assignment_probs(
     return np.array([[p00, 1 - p11], [1 - p00, p11]])
 
 
-def _run(qc: "QuantumComputer", program: "Program") -> List[List[int]]:
+def _run(qc: "PyquilApiQuantumComputer", program: "Program") -> List[List[int]]:
     result = qc.run(qc.compiler.native_quil_to_executable(program))
     bitstrings = result.readout_data.get("ro")
     assert bitstrings is not None
diff --git a/pyquil/noise_gates.py b/pyquil/noise_gates.py
index 114ca170e..b7c7c6e3e 100644
--- a/pyquil/noise_gates.py
+++ b/pyquil/noise_gates.py
@@ -47,7 +47,7 @@ def _transform_rpcq_qubit_gate_info_to_qvm_noise_supported_gate(qubit_id: int, g
             return None
 
         parameters = [Parameter(param) if isinstance(param, str) else param for param in gate.parameters]
-        return Gate(gate.operator, parameters, [unpack_qubit(qubit_id)])
+        return Gate(gate.operator, parameters, [unpack_qubit(qubit_id)])  # type: ignore
 
     if gate.operator == Supported1QGate.RZ:
         return Gate(Supported1QGate.RZ, [Parameter("theta")], [unpack_qubit(qubit_id)])
@@ -85,8 +85,8 @@ def _transform_rpcq_edge_gate_info_to_qvm_noise_supported_gates(edge: Edge) -> L
         return gates
 
     if Supported2QGate.WILDCARD in operators:
-        gates.append(Gate("_", "_", targets))
-        gates.append(Gate("_", "_", targets[::-1]))
+        gates.append(Gate("_", "_", targets))  # type: ignore
+        gates.append(Gate("_", "_", targets[::-1]))  # type: ignore
         return gates
 
     _log.warning(f"no gate for edge {edge.ids}")
diff --git a/pyquil/operator_estimation.py b/pyquil/operator_estimation.py
index 42a4c6190..bfa46a8a8 100644
--- a/pyquil/operator_estimation.py
+++ b/pyquil/operator_estimation.py
@@ -324,7 +324,7 @@ def _stats_from_measurements(
     setting: ExperimentSetting,
     n_shots: int,
     coeff: float = 1.0,
-) -> Tuple[np.number, np.number]:  # type: ignore
+) -> Tuple[np.number, np.number]:
     """
     :param bs_results: results from running `qc.run`
     :param qubit_index_map: dict mapping qubit to classical register index
diff --git a/pyquil/paulis.py b/pyquil/paulis.py
index eec904bcc..5325c2e8c 100644
--- a/pyquil/paulis.py
+++ b/pyquil/paulis.py
@@ -107,7 +107,7 @@ def __init__(self, *args: object, **kwargs: object):
         # recent typeshed that contains the following fix:
         # https://github.com/python/typeshed/pull/1704
         # https://github.com/python/mypy/pull/8139
-        super().__init__(*args, **kwargs)  # type: ignore
+        super().__init__(*args, **kwargs)
 
 
 integer_types = (int, np.int64, np.int32, np.int16, np.int8)
@@ -185,7 +185,7 @@ def id(self, sort_ops: bool = True) -> str:
                 "sortable and should be avoided in favor of `operations_as_set`.",
                 FutureWarning,
             )
-            return "".join("{}{}".format(self._ops[q], q) for q in sorted(self._ops.keys()))
+            return "".join("{}{}".format(self._ops[q], q) for q in sorted(self._ops.keys()))  # type: ignore
         else:
             return "".join("{}{}".format(p, q) for q, p in self._ops.items())
 
@@ -450,7 +450,7 @@ def from_compact_str(cls, str_pauli_term: str) -> "PauliTerm":
         # parse the operator
         str_op = re.sub(r"\*", "", str_op)
         if not re.match(r"^(([XYZ])(\d+))+$", str_op):
-            raise ValueError(fr"Could not parse operator string {str_op}. It should match ^(([XYZ])(\d+))+$")
+            raise ValueError(rf"Could not parse operator string {str_op}. It should match ^(([XYZ])(\d+))+$")
 
         for factor in re.finditer(r"([XYZ])(\d+)", str_op):
             op *= cls(factor.group(1), int(factor.group(2)))
diff --git a/pyquil/quil.py b/pyquil/quil.py
index 15fd7b56c..54efbe86b 100644
--- a/pyquil/quil.py
+++ b/pyquil/quil.py
@@ -160,22 +160,22 @@ def __init__(self, *instructions: InstructionDesignator):
 
     @property
     def calibrations(self) -> List[Union[DefCalibration, DefMeasureCalibration]]:
-        """ A list of Quil-T calibration definitions. """
+        """A list of Quil-T calibration definitions."""
         return self._calibrations
 
     @property
     def waveforms(self) -> Dict[str, DefWaveform]:
-        """ A mapping from waveform names to their corresponding definitions. """
+        """A mapping from waveform names to their corresponding definitions."""
         return self._waveforms
 
     @property
     def frames(self) -> Dict[Frame, DefFrame]:
-        """ A mapping from Quil-T frames to their definitions. """
+        """A mapping from Quil-T frames to their definitions."""
         return self._frames
 
     @property
     def declarations(self) -> Dict[str, Declare]:
-        """ A mapping from declared region names to their declarations. """
+        """A mapping from declared region names to their declarations."""
         return self._declarations
 
     def copy_everything_except_instructions(self) -> "Program":
diff --git a/pyquil/quilatom.py b/pyquil/quilatom.py
index 1dfa5490e..86a94537f 100644
--- a/pyquil/quilatom.py
+++ b/pyquil/quilatom.py
@@ -405,7 +405,7 @@ def substitute_array(a: Union[Sequence[Expression], np.ndarray], d: ParameterSub
     :return: An array of partially substituted Expressions, or numbers.
     """
     a = np.asarray(a, order="C")
-    return np.array([substitute(v, d) for v in a.flat]).reshape(a.shape)  # type: ignore
+    return np.array([substitute(v, d) for v in a.flat]).reshape(a.shape)
 
 
 class Parameter(QuilAtom, Expression):
@@ -568,7 +568,7 @@ class Pow(BinaryExp):
 
     @staticmethod
     def fn(a: ExpressionDesignator, b: ExpressionDesignator) -> Union["Pow", ExpressionValueDesignator]:
-        return a ** b
+        return a**b
 
     def __init__(self, op1: ExpressionDesignator, op2: ExpressionDesignator):
         super(Pow, self).__init__(op1, op2)
@@ -840,7 +840,7 @@ def default(obj: Optional[float], val: float) -> float:
 
 
 def _complex_str(iq: Any) -> str:
-    """ Convert a number to a string. """
+    """Convert a number to a string."""
     if isinstance(iq, Complex):
         return f"{iq.real}" if iq.imag == 0.0 else f"{iq.real} + ({iq.imag})*i"
     else:
diff --git a/pyquil/quiltcalibrations.py b/pyquil/quiltcalibrations.py
index 380d20d6c..d58e20733 100644
--- a/pyquil/quiltcalibrations.py
+++ b/pyquil/quiltcalibrations.py
@@ -168,5 +168,5 @@ def unpack_field(cal_field, instr_field):
 
 
 def expand_calibration(match: CalibrationMatch) -> List[AbstractInstruction]:
-    """" Expand the body of a calibration from a match. """
+    """ " Expand the body of a calibration from a match."""
     return [fill_placeholders(instr, match.settings) for instr in match.cal.instrs]
diff --git a/pyquil/quiltwaveforms.py b/pyquil/quiltwaveforms.py
index d21832b37..b4a6ad3c6 100644
--- a/pyquil/quiltwaveforms.py
+++ b/pyquil/quiltwaveforms.py
@@ -17,7 +17,7 @@
 
 
 def waveform(name: str) -> Callable[[type], type]:
-    """ Define a Quil-T wavefom with the given name. """
+    """Define a Quil-T wavefom with the given name."""
 
     def wrap(cls: type) -> type:
         cls: type = dataclass(cls)
@@ -109,7 +109,7 @@ def samples(self, rate: float) -> np.ndarray:
 
 @waveform("gaussian")
 class GaussianWaveform(TemplateWaveform):
-    """ A Gaussian pulse. """
+    """A Gaussian pulse."""
 
     fwhm: float
     """ The Full-Width-Half-Max of the Gaussian (seconds). """
@@ -140,13 +140,13 @@ def __str__(self) -> str:
     def samples(self, rate: float) -> np.ndarray:
         ts = np.arange(self.num_samples(rate), dtype=np.complex128) / rate
         sigma = 0.5 * self.fwhm / np.sqrt(2.0 * np.log(2.0))
-        iqs = np.exp(-0.5 * (ts - self.t0) ** 2 / sigma ** 2)
+        iqs = np.exp(-0.5 * (ts - self.t0) ** 2 / sigma**2)
         return _update_envelope(iqs, rate, scale=self.scale, phase=self.phase, detuning=self.detuning)
 
 
 @waveform("drag_gaussian")
 class DragGaussianWaveform(TemplateWaveform):
-    """ A DRAG Gaussian pulse. """
+    """A DRAG Gaussian pulse."""
 
     fwhm: float
     """ The Full-Width-Half-Max of the gaussian (seconds). """
@@ -190,8 +190,8 @@ def __str__(self) -> str:
     def samples(self, rate: float) -> np.ndarray:
         ts = np.arange(self.num_samples(rate), dtype=np.complex128) / rate
         sigma = 0.5 * self.fwhm / np.sqrt(2.0 * np.log(2.0))
-        env = np.exp(-0.5 * (ts - self.t0) ** 2 / sigma ** 2)
-        env_der = (self.alpha * (1.0 / (2 * np.pi * self.anh * sigma ** 2))) * (ts - self.t0) * env
+        env = np.exp(-0.5 * (ts - self.t0) ** 2 / sigma**2)
+        env_der = (self.alpha * (1.0 / (2 * np.pi * self.anh * sigma**2))) * (ts - self.t0) * env
         iqs = env + 1.0j * env_der
         return _update_envelope(iqs, rate, scale=self.scale, phase=self.phase, detuning=self.detuning)
 
@@ -251,14 +251,14 @@ def __str__(self) -> str:
     def samples(self, rate: float) -> np.ndarray:
         ts = np.arange(self.num_samples(rate), dtype=np.complex128) / rate
         sigma = 0.5 * self.fwhm / np.sqrt(2.0 * np.log(2.0))
-        exponent_of_t = 0.5 * (ts - self.t0) ** 2 / sigma ** 2
+        exponent_of_t = 0.5 * (ts - self.t0) ** 2 / sigma**2
         gauss = np.exp(-exponent_of_t)
         env = (1 - self.second_order_hrm_coeff * exponent_of_t) * gauss
         deriv_prefactor = -self.alpha / (2 * np.pi * self.anh)
         env_der = (
             deriv_prefactor
             * (ts - self.t0)
-            / (sigma ** 2)
+            / (sigma**2)
             * gauss
             * (self.second_order_hrm_coeff * (exponent_of_t - 1) - 1)
         )
@@ -268,7 +268,7 @@ def samples(self, rate: float) -> np.ndarray:
 
 @waveform("erf_square")
 class ErfSquareWaveform(TemplateWaveform):
-    """ A pulse with a flat top and edges that are error functions (erf). """
+    """A pulse with a flat top and edges that are error functions (erf)."""
 
     risetime: float
     """ The width of each of the rise and fall sections of the pulse (seconds). """
@@ -312,7 +312,7 @@ def samples(self, rate: float) -> np.ndarray:
         vals = 0.5 * (erf((ts - t1) / sigma) - erf((ts - t2) / sigma))
         zeros_left = np.zeros(int(np.ceil(self.pad_left * rate)), dtype=np.complex128)
         zeros_right = np.zeros(int(np.ceil(self.pad_right * rate)), dtype=np.complex128)
-        iqs = np.concatenate((zeros_left, vals, zeros_right))
+        iqs = np.concatenate((zeros_left, vals, zeros_right))  # type: ignore
         return _update_envelope(iqs, rate, scale=self.scale, phase=self.phase, detuning=self.detuning)
 
 
diff --git a/pyquil/simulation/_numpy.py b/pyquil/simulation/_numpy.py
index 721702efd..0427df43f 100644
--- a/pyquil/simulation/_numpy.py
+++ b/pyquil/simulation/_numpy.py
@@ -191,7 +191,7 @@ def __init__(self, n_qubits: int, rs: Optional[RandomState] = None):
         :param rs: a RandomState (should be shared with the owning :py:class:`PyQVM`) for
             doing anything stochastic. A value of ``None`` disallows doing anything stochastic.
         """
-        super().__init__(n_qubits=n_qubits, rs=rs)
+        super().__init__(n_qubits=n_qubits, rs=rs)  # type: ignore
 
         self.n_qubits = n_qubits
         self.rs = rs
@@ -219,7 +219,7 @@ def sample_bitstrings(self, n_samples: int) -> np.ndarray:
         # reminder: qubit 0 is on the left in einsum simulator.
         probabilities = np.abs(self.wf.reshape(-1)) ** 2
         possible_bitstrings = all_bitstrings(self.n_qubits)
-        inds = self.rs.choice(2 ** self.n_qubits, n_samples, p=probabilities)
+        inds = self.rs.choice(2**self.n_qubits, n_samples, p=probabilities)
         return possible_bitstrings[inds, :]  # type: ignore
 
     def do_measurement(self, qubit: int) -> int:
@@ -291,7 +291,7 @@ def expectation(self, operator: Union[PauliTerm, PauliSum]) -> float:
         if not isinstance(operator, PauliSum):
             operator = PauliSum([operator])
 
-        return sum(_term_expectation(self.wf, term) for term in operator)
+        return sum(_term_expectation(self.wf, term) for term in operator)  # type: ignore
 
     def reset(self) -> "NumpyWavefunctionSimulator":
         """
diff --git a/pyquil/simulation/_reference.py b/pyquil/simulation/_reference.py
index 79436a6e2..7b774818c 100644
--- a/pyquil/simulation/_reference.py
+++ b/pyquil/simulation/_reference.py
@@ -14,7 +14,7 @@
 #    limitations under the License.
 ##############################################################################
 import warnings
-from typing import Any, List, Optional, Sequence, Tuple, Union, cast
+from typing import Any, List, Optional, Sequence, Union
 
 import numpy as np
 from numpy.random.mtrand import RandomState
@@ -57,7 +57,7 @@ def _is_valid_quantum_state(state_matrix: np.ndarray, rtol: float = 1e-05, atol:
     trace_one = np.isclose(np.trace(state_matrix), 1, rtol, atol)
     if not trace_one:
         raise ValueError("The state matrix is not trace one.")
-    evals = np.linalg.eigvals(state_matrix)
+    evals = np.linalg.eigvals(state_matrix)  # type: ignore
     non_neg_eigs = all([False if val < -atol else True for val in evals])
     if not non_neg_eigs:
         raise ValueError("The state matrix has negative Eigenvalues of order -" + str(atol) + ".")
@@ -81,12 +81,12 @@ def __init__(self, n_qubits: int, rs: Optional[RandomState] = None):
         :param rs: a RandomState (should be shared with the owning :py:class:`PyQVM`) for
             doing anything stochastic. A value of ``None`` disallows doing anything stochastic.
         """
-        super().__init__(n_qubits=n_qubits, rs=rs)
+        super().__init__(n_qubits=n_qubits, rs=rs)  # type: ignore
 
         self.n_qubits = n_qubits
         self.rs = rs
 
-        self.wf = np.zeros(2 ** n_qubits, dtype=np.complex128)
+        self.wf = np.zeros(2**n_qubits, dtype=np.complex128)
         self.wf[0] = complex(1.0, 0)
 
     def sample_bitstrings(self, n_samples: int) -> np.ndarray:
@@ -105,9 +105,9 @@ def sample_bitstrings(self, n_samples: int) -> np.ndarray:
             )
         probabilities = np.abs(self.wf) ** 2
         possible_bitstrings = all_bitstrings(self.n_qubits)
-        inds = self.rs.choice(2 ** self.n_qubits, n_samples, p=probabilities)
+        inds = self.rs.choice(2**self.n_qubits, n_samples, p=probabilities)
         bitstrings = possible_bitstrings[inds, :]
-        bitstrings = np.flip(bitstrings, axis=1)  # qubit ordering: 0 on the left.
+        bitstrings = np.flip(bitstrings, axis=1)  # type: ignore # qubit ordering: 0 on the left.
         return bitstrings  # type: ignore
 
     def do_gate(self, gate: Gate) -> "ReferenceWavefunctionSimulator":
@@ -153,12 +153,12 @@ def do_measurement(self, qubit: int) -> int:
         # generate random number to 'roll' for measure
         if self.rs.uniform() < prob_zero:
             # decohere state using the measure_0 operator
-            unitary = measure_0 @ (np.eye(2 ** self.n_qubits) / np.sqrt(prob_zero))
+            unitary = measure_0 @ (np.eye(2**self.n_qubits) / np.sqrt(prob_zero))
             self.wf = unitary.dot(self.wf)
             return 0
         else:  # measure one
             measure_1 = lifted_gate_matrix(matrix=P1, qubit_inds=[qubit], n_qubits=self.n_qubits)
-            unitary = measure_1 @ (np.eye(2 ** self.n_qubits) / np.sqrt(1 - prob_zero))
+            unitary = measure_1 @ (np.eye(2**self.n_qubits) / np.sqrt(1 - prob_zero))
             self.wf = unitary.dot(self.wf)
             return 1
 
@@ -172,7 +172,7 @@ def expectation(self, operator: Union[PauliTerm, PauliSum]) -> float:
         if not isinstance(operator, PauliSum):
             operator = PauliSum([operator])
 
-        return sum(_term_expectation(self.wf, term, n_qubits=self.n_qubits) for term in operator)
+        return sum(_term_expectation(self.wf, term, n_qubits=self.n_qubits) for term in operator)  # type: ignore
 
     def reset(self) -> "ReferenceWavefunctionSimulator":
         """
@@ -195,7 +195,7 @@ def zero_state_matrix(n_qubits: int) -> np.ndarray:
     :param n_qubits: The number of qubits.
     :return: The state matrix  ``|000...0><000...0|`` for `n_qubits`.
     """
-    state_matrix = np.zeros((2 ** n_qubits, 2 ** n_qubits), dtype=np.complex128)
+    state_matrix = np.zeros((2**n_qubits, 2**n_qubits), dtype=np.complex128)
     state_matrix[0, 0] = complex(1.0, 0)
     return state_matrix
 
@@ -217,7 +217,7 @@ class ReferenceDensitySimulator(AbstractQuantumSimulator):
     """
 
     def __init__(self, n_qubits: int, rs: Optional[RandomState] = None):
-        super().__init__(n_qubits=n_qubits, rs=rs)
+        super().__init__(n_qubits=n_qubits, rs=rs)  # type: ignore
 
         self.n_qubits = n_qubits
         self.rs = rs
@@ -280,9 +280,9 @@ def sample_bitstrings(self, n_samples: int, tol_factor: float = 1e8) -> np.ndarr
         # Ensure they sum to one
         probabilities = probabilities / np.sum(probabilities)
         possible_bitstrings = all_bitstrings(self.n_qubits)
-        inds = self.rs.choice(2 ** self.n_qubits, n_samples, p=probabilities)
+        inds = self.rs.choice(2**self.n_qubits, n_samples, p=probabilities)
         bitstrings = possible_bitstrings[inds, :]
-        bitstrings = np.flip(bitstrings, axis=1)  # qubit ordering: 0 on the left.
+        bitstrings = np.flip(bitstrings, axis=1)  # type: ignore  # qubit ordering: 0 on the left.
         return bitstrings  # type: ignore
 
     def do_gate(self, gate: Gate) -> "AbstractQuantumSimulator":
@@ -319,17 +319,17 @@ def do_measurement(self, qubit: int) -> int:
                 "random state of the simulator. Might I suggest using a PyQVM object?"
             )
         measure_0 = lifted_gate_matrix(matrix=P0, qubit_inds=[qubit], n_qubits=self.n_qubits)
-        prob_zero = np.trace(measure_0 @ self.density)  # type: ignore
+        prob_zero = np.trace(measure_0 @ self.density)
 
         # generate random number to 'roll' for measurement
         if self.rs.uniform() < prob_zero:
             # decohere state using the measure_0 operator
-            unitary = measure_0 @ (np.eye(2 ** self.n_qubits) / np.sqrt(prob_zero))
+            unitary = measure_0 @ (np.eye(2**self.n_qubits) / np.sqrt(prob_zero))
             self.density = unitary.dot(self.density).dot(np.conj(unitary.T))
             return 0
         else:  # measure one
             measure_1 = lifted_gate_matrix(matrix=P1, qubit_inds=[qubit], n_qubits=self.n_qubits)
-            unitary = measure_1 @ (np.eye(2 ** self.n_qubits) / np.sqrt(1 - prob_zero))
+            unitary = measure_1 @ (np.eye(2**self.n_qubits) / np.sqrt(1 - prob_zero))
             self.density = unitary.dot(self.density).dot(np.conj(unitary.T))
             return 1
 
@@ -347,7 +347,7 @@ def reset(self) -> "AbstractQuantumSimulator":
         return self
 
     def do_post_gate_noise(self, noise_type: str, noise_prob: float, qubits: List[int]) -> "ReferenceDensitySimulator":
-        kraus_ops = cast(Tuple[np.ndarray, ...], KRAUS_OPS[noise_type](p=noise_prob))
+        kraus_ops = KRAUS_OPS[noise_type](p=noise_prob)
         if np.isclose(noise_prob, 0.0):
             warnings.warn(f"Skipping {noise_type} post-gate noise because noise_prob is close to 0")
             return self
diff --git a/pyquil/simulation/tools.py b/pyquil/simulation/tools.py
index effdf8ee2..a6b7d7294 100644
--- a/pyquil/simulation/tools.py
+++ b/pyquil/simulation/tools.py
@@ -31,7 +31,7 @@ def all_bitstrings(n_bits: int) -> np.ndarray:
     This should be the same as ``np.array(list(itertools.product([0,1], repeat=n_bits)))``
     but faster.
     """
-    n_bitstrings = 2 ** n_bits
+    n_bitstrings = 2**n_bits
     out = np.zeros(shape=(n_bitstrings, n_bits), dtype=np.int8)
 
     tf = np.array([False, True])
@@ -43,7 +43,7 @@ def all_bitstrings(n_bits: int) -> np.ndarray:
         # j indexes from the *right*
         j = n_bits - i - 1
 
-        out[np.tile(np.repeat(tf, 2 ** j), 2 ** i), i] = 1
+        out[np.tile(np.repeat(tf, 2**j), 2**i), i] = 1  # type: ignore
     return out
 
 
@@ -85,10 +85,10 @@ def qubit_adjacent_lifted_gate(i: int, matrix: np.ndarray, n_qubits: int) -> np.
     # Outer-product to lift gate to complete Hilbert space
 
     # bottom: i qubits below target
-    bottom_matrix = np.eye(2 ** i, dtype=np.complex128)
+    bottom_matrix = np.eye(2**i, dtype=np.complex128)
     # top: Nq - i (bottom) - gate_size (gate) qubits above target
     top_qubits = n_qubits - i - gate_size
-    top_matrix = np.eye(2 ** top_qubits, dtype=np.complex128)
+    top_matrix = np.eye(2**top_qubits, dtype=np.complex128)
 
     return np.kron(top_matrix, np.kron(matrix, bottom_matrix))  # type: ignore
 
@@ -119,8 +119,8 @@ def two_swap_helper(j: int, k: int, num_qubits: int, qubit_map: np.ndarray) -> T
     if not (0 <= j < num_qubits and 0 <= k < num_qubits):
         raise ValueError("Permutation SWAP index not valid")
 
-    perm = np.eye(2 ** num_qubits, dtype=np.complex128)
-    new_qubit_map = np.copy(qubit_map)
+    perm = np.eye(2**num_qubits, dtype=np.complex128)
+    new_qubit_map = np.copy(qubit_map)  # type: ignore
 
     if j == k:
         # nothing happens
@@ -175,7 +175,7 @@ def permutation_arbitrary(qubit_inds: Sequence[int], n_qubits: int) -> Tuple[np.
         start_i - starting index to lift gate from
     """  # noqa: E501
     # Begin construction of permutation
-    perm = np.eye(2 ** n_qubits, dtype=np.complex128)
+    perm = np.eye(2**n_qubits, dtype=np.complex128)
 
     # First, sort the list and find the median.
     sorted_inds = np.sort(qubit_inds)
@@ -248,7 +248,7 @@ def lifted_gate_matrix(matrix: np.ndarray, qubit_inds: Sequence[int], n_qubits:
     else:
         # Python can't deal with `arr[:-0]`
         check = final_map[-gate_size - start_i :]
-    np.testing.assert_allclose(check, qubit_inds)
+    np.testing.assert_allclose(check, qubit_inds)  # type: ignore
 
     v_matrix = qubit_adjacent_lifted_gate(start_i, matrix, n_qubits)
     return np.dot(np.conj(pi_permutation_matrix.T), np.dot(v_matrix, pi_permutation_matrix))  # type: ignore
@@ -329,7 +329,7 @@ def program_unitary(program: Program, n_qubits: int) -> np.ndarray:
     :param program: A program consisting only of :py:class:`Gate`.:
     :return: a unitary corresponding to the composition of the program's gates.
     """
-    umat: np.ndarray = np.eye(2 ** n_qubits)
+    umat: np.ndarray = np.eye(2**n_qubits)
     for instruction in program:
         if isinstance(instruction, Gate):
             unitary = lifted_gate(gate=instruction, n_qubits=n_qubits)
@@ -374,12 +374,12 @@ def lifted_pauli(pauli_sum: Union[PauliSum, PauliTerm], qubits: List[int]) -> np
         pauli_sum = PauliSum([pauli_sum])
 
     n_qubits = len(qubits)
-    result_hilbert = np.zeros((2 ** n_qubits, 2 ** n_qubits), dtype=np.complex128)
+    result_hilbert = np.zeros((2**n_qubits, 2**n_qubits), dtype=np.complex128)
     # left kronecker product corresponds to the correct basis ordering
     for term in pauli_sum.terms:
         term_hilbert = np.array([1])
         for qubit in qubits:
-            term_hilbert = np.kron(QUANTUM_GATES[term[qubit]], term_hilbert)
+            term_hilbert = np.kron(QUANTUM_GATES[term[qubit]], term_hilbert)  # type: ignore
 
         result_hilbert += term_hilbert * cast(complex, term.coefficient)
 
@@ -419,7 +419,7 @@ def lifted_state_operator(state: TensorProductState, qubits: List[int]) -> np.nd
         assert oneq_state.qubit == qubit
         state_vector = STATES[oneq_state.label][oneq_state.index][:, np.newaxis]
         state_matrix = state_vector @ state_vector.conj().T
-        mat = np.kron(state_matrix, mat)
+        mat = np.kron(state_matrix, mat)  # type: ignore
     return mat
 
 
@@ -444,4 +444,4 @@ def scale_out_phase(unitary1: np.ndarray, unitary2: np.ndarray) -> np.ndarray:
             goodness_value = np.abs(unitary1[j, 0])
             rescale_value = unitary2[j, 0] / unitary1[j, 0]
 
-    return rescale_value * unitary1  # type: ignore
+    return rescale_value * unitary1
diff --git a/pyquil/wavefunction.py b/pyquil/wavefunction.py
index 1eaecf092..982ff7b2e 100644
--- a/pyquil/wavefunction.py
+++ b/pyquil/wavefunction.py
@@ -63,7 +63,7 @@ def zeros(qubit_num: int) -> "Wavefunction":
         :param qubit_num:
         :return: A Wavefunction in the ground state
         """
-        amplitude_vector = np.zeros(2 ** qubit_num)
+        amplitude_vector = np.zeros(2**qubit_num)
         amplitude_vector[0] = 1.0
         return Wavefunction(amplitude_vector)
 
@@ -74,7 +74,7 @@ def from_bit_packed_string(coef_string: bytes) -> "Wavefunction":
         :param coef_string:
         """
         num_cfloat = len(coef_string) // OCTETS_PER_COMPLEX_DOUBLE
-        amplitude_vector = np.ndarray(shape=(num_cfloat,), buffer=coef_string, dtype=">c16")
+        amplitude_vector: np.ndarray = np.ndarray(shape=(num_cfloat,), buffer=coef_string, dtype=">c16")
         return Wavefunction(amplitude_vector)
 
     def __len__(self) -> int:
@@ -94,7 +94,7 @@ def __str__(self) -> str:
 
     def probabilities(self) -> np.ndarray:
         """Returns an array of probabilities in lexicographical order"""
-        return np.abs(self.amplitudes) ** 2  # type: ignore
+        return np.abs(self.amplitudes) ** 2
 
     def get_outcome_probs(self) -> Dict[str, float]:
         """
@@ -167,7 +167,7 @@ def plot(self, qubit_subset: Optional[Sequence[int]] = None) -> None:
             sub_dict = {}
             qubit_num = len(self)
             for i in qubit_subset:
-                if i > (2 ** qubit_num - 1):
+                if i > (2**qubit_num - 1):
                     raise IndexError("Index {} too large for {} qubits.".format(i, qubit_num))
                 else:
                     sub_dict[get_bitstring_from_index(i, qubit_num)] = prob_dict[get_bitstring_from_index(i, qubit_num)]
@@ -197,7 +197,7 @@ def get_bitstring_from_index(index: int, qubit_num: int) -> str:
     :return: the bitstring
     :rtype: str
     """
-    if index > (2 ** qubit_num - 1):
+    if index > (2**qubit_num - 1):
         raise IndexError("Index {} too large for {} qubits.".format(index, qubit_num))
     return bin(index)[2:].rjust(qubit_num, "0")
 
diff --git a/test/unit/test_engagement_manager.py b/test/unit/test_engagement_manager.py
index 63c0b1ac8..dae2dcb54 100644
--- a/test/unit/test_engagement_manager.py
+++ b/test/unit/test_engagement_manager.py
@@ -24,13 +24,16 @@
 
 DEFAULT_ENDPOINT_ID = "some-endpoint"
 
+
 @respx.mock
 def test_get_engagement__refreshes_engagement_when_cached_engagement_expired(
     client_configuration: QCSClientConfiguration,
 ):
     engagement_manager = EngagementManager(client_configuration=client_configuration)
     cache_engagement(
-        engagement_manager, expired_engagement(quantum_processor_id="some-processor"), client_configuration,
+        engagement_manager,
+        expired_engagement(quantum_processor_id="some-processor"),
+        client_configuration,
     )
     respx.post(
         url=f"{client_configuration.profile.api_url}/v1/engagements",
@@ -58,11 +61,11 @@ def test_get_engagement__refreshes_engagement_when_cached_engagement_expired__us
     respx.post(
         url=f"{client_configuration.profile.api_url}/v1/engagements",
         json={"quantumProcessorId": "some-processor", "endpointId": "custom-endpoint"},
-    ).respond(json=unexpired_engagement(quantum_processor_id="some-processor").to_dict())
+    ).respond(json=unexpired_engagement(quantum_processor_id="some-processor", endpoint_id="custom-endpoint").to_dict())
 
-    engagement = engagement_manager.get_engagement(quantum_processor_id="some-processor")
+    engagement = engagement_manager.get_engagement(quantum_processor_id="some-processor", endpoint_id="custom-endpoint")
 
-    assert engagement == unexpired_engagement(quantum_processor_id="some-processor")
+    assert engagement == unexpired_engagement(quantum_processor_id="some-processor", endpoint_id="custom-endpoint")
 
 
 @respx.mock
@@ -119,7 +122,7 @@ def cache_engagement(
         endpoint_id = engagement.endpoint_id
 
     cached_engagement = engagement_manager.get_engagement(
-        quantum_processor_id=engagement.quantum_processor_id, endpoint_id=endpoint_id
+        quantum_processor_id=engagement.quantum_processor_ids[0], endpoint_id=endpoint_id
     )
 
     assert cached_engagement == engagement
@@ -132,15 +135,13 @@ def mock_engagement(engagement: EngagementWithCredentials, *, client_configurati
     """
 
     if engagement.endpoint_id == DEFAULT_ENDPOINT_ID:
-        respx.post(
-            url=f"{client_configuration.profile.api_url}/v1/engagements",
-            json={"quantumProcessorId": engagement.quantum_processor_id}
-        ).respond(json=engagement.to_dict())
+        json = {"quantumProcessorId": engagement.quantum_processor_ids[0]}
+    else:
+        json = {"quantumProcessorId": engagement.quantum_processor_ids[0], "endpointId": engagement.endpoint_id}
 
-    respx.post(
-        url=f"{client_configuration.profile.api_url}/v1/engagements",
-        json={"endpointId": engagement.endpoint_id}
-    ).respond(json=engagement.to_dict())
+    respx.post(url=f"{client_configuration.profile.api_url}/v1/engagements", json=json).respond(
+        json=engagement.to_dict()
+    )
 
 
 def make_engagement(
@@ -155,7 +156,7 @@ def make_engagement(
         ),
         endpoint_id=endpoint_id or DEFAULT_ENDPOINT_ID,
         expires_at=expires_at,
-        quantum_processor_id=quantum_processor_id,
+        quantum_processor_ids=[quantum_processor_id],
         user_id="some-user",
         minimum_priority=42,
     )
diff --git a/test/unit/test_qpu_client.py b/test/unit/test_qpu_client.py
index 98c482daa..fd43a15fc 100644
--- a/test/unit/test_qpu_client.py
+++ b/test/unit/test_qpu_client.py
@@ -332,7 +332,7 @@ def engagement(
         credentials=credentials,
         endpoint_id="some-endpoint",
         expires_at=str(datetime.now(tzutc()) + timedelta(seconds=seconds_left)),
-        quantum_processor_id=quantum_processor_id,
+        quantum_processor_ids=[quantum_processor_id],
         user_id="some-user",
     )